Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Nkx2-6P43688 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nkx2-6P43688 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nkx2-6P43688 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
Nkx2-6P43688 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nkx2-6P43688 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nkx2-6P43688 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nkx2-6P43688 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC15.99■□□□□ 0.15
Nkx2-6P43688 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
Nkx2-6P43688 Gm28033-201ENSMUST00000184224 96 ntBASIC15.99■□□□□ 0.15
Nkx2-6P43688 Gm45328-201ENSMUST00000210942 917 ntBASIC15.99■□□□□ 0.15
Nkx2-6P43688 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nkx2-6P43688 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nkx2-6P43688 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Nkx2-6P43688 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nkx2-6P43688 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nkx2-6P43688 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Nkx2-6P43688 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Nkx2-6P43688 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Nkx2-6P43688 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nkx2-6P43688 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nkx2-6P43688 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nkx2-6P43688 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
Nkx2-6P43688 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC15.98■□□□□ 0.15
Nkx2-6P43688 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Nkx2-6P43688 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nkx2-6P43688 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nkx2-6P43688 Cxcl14-202ENSMUST00000224801 1467 ntBASIC15.98■□□□□ 0.15
Nkx2-6P43688 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
Nkx2-6P43688 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
Nkx2-6P43688 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Nkx2-6P43688 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Nkx2-6P43688 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
Nkx2-6P43688 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Nkx2-6P43688 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nkx2-6P43688 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nkx2-6P43688 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC15.97■□□□□ 0.15
Nkx2-6P43688 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nkx2-6P43688 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nkx2-6P43688 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Nkx2-6P43688 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nkx2-6P43688 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Nkx2-6P43688 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nkx2-6P43688 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nkx2-6P43688 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Nkx2-6P43688 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nkx2-6P43688 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nkx2-6P43688 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nkx2-6P43688 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nkx2-6P43688 Gm14464-201ENSMUST00000119658 1254 ntBASIC15.97■□□□□ 0.15
Nkx2-6P43688 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nkx2-6P43688 Ighv6-1-201ENSMUST00000193612 343 ntBASIC15.97■□□□□ 0.15
Nkx2-6P43688 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC15.97■□□□□ 0.15
Nkx2-6P43688 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nkx2-6P43688 Gm43294-201ENSMUST00000202850 2490 ntBASIC15.97■□□□□ 0.15
Nkx2-6P43688 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nkx2-6P43688 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC15.97■□□□□ 0.15
Nkx2-6P43688 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nkx2-6P43688 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Nkx2-6P43688 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nkx2-6P43688 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Nkx2-6P43688 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nkx2-6P43688 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nkx2-6P43688 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Nkx2-6P43688 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Nkx2-6P43688 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Nkx2-6P43688 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC15.96■□□□□ 0.15
Nkx2-6P43688 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Nkx2-6P43688 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Nkx2-6P43688 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Nkx2-6P43688 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Nkx2-6P43688 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Nkx2-6P43688 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Nkx2-6P43688 Gm27742-201ENSMUST00000184667 60 ntBASIC15.96■□□□□ 0.15
Nkx2-6P43688 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC15.96■□□□□ 0.15
Nkx2-6P43688 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Nkx2-6P43688 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Nkx2-6P43688 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Nkx2-6P43688 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Nkx2-6P43688 Gm45244-201ENSMUST00000211328 2200 ntBASIC15.96■□□□□ 0.15
Nkx2-6P43688 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Nkx2-6P43688 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC15.96■□□□□ 0.15
Nkx2-6P43688 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Nkx2-6P43688 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Nkx2-6P43688 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC15.95■□□□□ 0.14
Nkx2-6P43688 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nkx2-6P43688 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC15.95■□□□□ 0.14
Nkx2-6P43688 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nkx2-6P43688 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
Nkx2-6P43688 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nkx2-6P43688 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Nkx2-6P43688 Gm6623-201ENSMUST00000173570 544 ntBASIC15.95■□□□□ 0.14
Nkx2-6P43688 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Nkx2-6P43688 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nkx2-6P43688 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nkx2-6P43688 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Nkx2-6P43688 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nkx2-6P43688 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Nkx2-6P43688 Gm10461-201ENSMUST00000202073 4786 ntBASIC15.95■□□□□ 0.14
Nkx2-6P43688 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms