Protein–RNA interactions for Protein: P42580

Nkx1-2, NK1 transcription factor-related protein 2, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-2P42580 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Nkx1-2P42580 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nkx1-2P42580 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nkx1-2P42580 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nkx1-2P42580 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Nkx1-2P42580 Gm10653-202ENSMUST00000139570 835 ntBASIC20.81■□□□□ 0.92
Nkx1-2P42580 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Nkx1-2P42580 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC20.81■□□□□ 0.92
Nkx1-2P42580 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC20.81■□□□□ 0.92
Nkx1-2P42580 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Nkx1-2P42580 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nkx1-2P42580 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Nkx1-2P42580 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC20.81■□□□□ 0.92
Nkx1-2P42580 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Nkx1-2P42580 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Nkx1-2P42580 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nkx1-2P42580 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
Nkx1-2P42580 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Nkx1-2P42580 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nkx1-2P42580 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Nkx1-2P42580 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Nkx1-2P42580 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Nkx1-2P42580 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nkx1-2P42580 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nkx1-2P42580 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nkx1-2P42580 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nkx1-2P42580 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Nkx1-2P42580 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nkx1-2P42580 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
Nkx1-2P42580 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nkx1-2P42580 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nkx1-2P42580 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nkx1-2P42580 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC20.79■□□□□ 0.92
Nkx1-2P42580 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nkx1-2P42580 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nkx1-2P42580 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
Nkx1-2P42580 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nkx1-2P42580 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC20.79■□□□□ 0.92
Nkx1-2P42580 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nkx1-2P42580 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nkx1-2P42580 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC20.79■□□□□ 0.92
Nkx1-2P42580 Gm16011-201ENSMUST00000121567 2662 ntBASIC20.79■□□□□ 0.92
Nkx1-2P42580 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nkx1-2P42580 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nkx1-2P42580 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nkx1-2P42580 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nkx1-2P42580 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nkx1-2P42580 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC20.78■□□□□ 0.92
Nkx1-2P42580 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nkx1-2P42580 AC124581.1-201ENSMUST00000225416 1399 ntBASIC20.78■□□□□ 0.92
Nkx1-2P42580 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Nkx1-2P42580 Gm15378-201ENSMUST00000121894 207 ntBASIC20.78■□□□□ 0.92
Nkx1-2P42580 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Nkx1-2P42580 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nkx1-2P42580 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nkx1-2P42580 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nkx1-2P42580 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nkx1-2P42580 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nkx1-2P42580 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Nkx1-2P42580 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC20.77■□□□□ 0.92
Nkx1-2P42580 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nkx1-2P42580 Gm19430-201ENSMUST00000193847 2137 ntBASIC20.77■□□□□ 0.92
Nkx1-2P42580 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Nkx1-2P42580 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Nkx1-2P42580 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Nkx1-2P42580 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Nkx1-2P42580 Gm9694-201ENSMUST00000193347 1189 ntBASIC20.77■□□□□ 0.92
Nkx1-2P42580 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC20.77■□□□□ 0.92
Nkx1-2P42580 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nkx1-2P42580 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Nkx1-2P42580 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nkx1-2P42580 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
Nkx1-2P42580 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Nkx1-2P42580 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Nkx1-2P42580 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nkx1-2P42580 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nkx1-2P42580 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nkx1-2P42580 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Nkx1-2P42580 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nkx1-2P42580 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Nkx1-2P42580 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC20.76■□□□□ 0.91
Nkx1-2P42580 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC20.76■□□□□ 0.91
Nkx1-2P42580 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nkx1-2P42580 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Nkx1-2P42580 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nkx1-2P42580 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nkx1-2P42580 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
Nkx1-2P42580 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nkx1-2P42580 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Nkx1-2P42580 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Nkx1-2P42580 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC20.76■□□□□ 0.91
Nkx1-2P42580 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nkx1-2P42580 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nkx1-2P42580 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nkx1-2P42580 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
Nkx1-2P42580 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nkx1-2P42580 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Nkx1-2P42580 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
Nkx1-2P42580 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nkx1-2P42580 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms