Protein–RNA interactions for Protein: P41245

Mmp9, Matrix metalloproteinase-9, mousemouse

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp9P41245 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC14.23□□□□□ -0.13
Mmp9P41245 Gm10653-202ENSMUST00000139570 835 ntBASIC14.23□□□□□ -0.13
Mmp9P41245 Mir8112-201ENSMUST00000184382 131 ntBASIC14.23□□□□□ -0.13
Mmp9P41245 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC14.23□□□□□ -0.13
Mmp9P41245 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Mmp9P41245 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Mmp9P41245 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Mmp9P41245 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Mmp9P41245 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Mmp9P41245 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Mmp9P41245 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Mmp9P41245 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Mmp9P41245 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Mmp9P41245 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Mmp9P41245 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Mmp9P41245 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Mmp9P41245 Gm8839-201ENSMUST00000121279 1645 ntBASIC14.23□□□□□ -0.13
Mmp9P41245 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Mmp9P41245 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Mmp9P41245 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Mmp9P41245 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Mmp9P41245 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Mmp9P41245 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Mmp9P41245 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Mmp9P41245 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Mmp9P41245 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Mmp9P41245 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Mmp9P41245 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Mmp9P41245 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Mmp9P41245 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.22□□□□□ -0.13
Mmp9P41245 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Mmp9P41245 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Mmp9P41245 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Mmp9P41245 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Mmp9P41245 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC14.22□□□□□ -0.13
Mmp9P41245 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Mmp9P41245 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Mmp9P41245 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Mmp9P41245 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Mmp9P41245 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Mmp9P41245 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Mmp9P41245 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Mmp9P41245 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Mmp9P41245 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Mmp9P41245 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Mmp9P41245 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC14.21□□□□□ -0.13
Mmp9P41245 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Mmp9P41245 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Mmp9P41245 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
Mmp9P41245 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.21□□□□□ -0.13
Mmp9P41245 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Mmp9P41245 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC14.21□□□□□ -0.13
Mmp9P41245 Gm13234-201ENSMUST00000120010 747 ntBASIC14.21□□□□□ -0.13
Mmp9P41245 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Mmp9P41245 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Mmp9P41245 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC14.21□□□□□ -0.13
Mmp9P41245 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.21□□□□□ -0.13
Mmp9P41245 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Mmp9P41245 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Mmp9P41245 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Mmp9P41245 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Mmp9P41245 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Mmp9P41245 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Mmp9P41245 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Mmp9P41245 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mmp9P41245 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mmp9P41245 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mmp9P41245 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mmp9P41245 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mmp9P41245 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mmp9P41245 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mmp9P41245 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Mmp9P41245 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mmp9P41245 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mmp9P41245 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mmp9P41245 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mmp9P41245 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
Mmp9P41245 Mir5133-201ENSMUST00000174955 77 ntBASIC14.2□□□□□ -0.14
Mmp9P41245 Mir7071-201ENSMUST00000184847 69 ntBASIC14.2□□□□□ -0.14
Mmp9P41245 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Mmp9P41245 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mmp9P41245 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mmp9P41245 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC14.2□□□□□ -0.14
Mmp9P41245 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mmp9P41245 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Mmp9P41245 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mmp9P41245 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mmp9P41245 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mmp9P41245 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mmp9P41245 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mmp9P41245 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mmp9P41245 Gm36858-201ENSMUST00000194501 2391 ntBASIC14.19□□□□□ -0.14
Mmp9P41245 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mmp9P41245 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mmp9P41245 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mmp9P41245 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Mmp9P41245 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mmp9P41245 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mmp9P41245 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mmp9P41245 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms