Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sox6P40645 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC15.9■□□□□ 0.14
Sox6P40645 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sox6P40645 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sox6P40645 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sox6P40645 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sox6P40645 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC15.89■□□□□ 0.13
Sox6P40645 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sox6P40645 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Sox6P40645 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sox6P40645 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sox6P40645 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Sox6P40645 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sox6P40645 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Sox6P40645 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Sox6P40645 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC15.89■□□□□ 0.13
Sox6P40645 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sox6P40645 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sox6P40645 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Sox6P40645 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC15.89■□□□□ 0.13
Sox6P40645 Gm5643-201ENSMUST00000117081 966 ntBASIC15.89■□□□□ 0.13
Sox6P40645 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC15.89■□□□□ 0.13
Sox6P40645 H2-K2-201ENSMUST00000174250 1049 ntBASIC15.89■□□□□ 0.13
Sox6P40645 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Sox6P40645 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sox6P40645 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Sox6P40645 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Sox6P40645 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC15.89■□□□□ 0.13
Sox6P40645 Gm20628-201ENSMUST00000177363 3215 ntBASIC15.89■□□□□ 0.13
Sox6P40645 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sox6P40645 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC15.89■□□□□ 0.13
Sox6P40645 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sox6P40645 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sox6P40645 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sox6P40645 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Sox6P40645 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sox6P40645 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sox6P40645 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sox6P40645 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sox6P40645 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sox6P40645 Gm26917-202ENSMUST00000192833 3329 ntBASIC15.88■□□□□ 0.13
Sox6P40645 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Sox6P40645 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sox6P40645 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sox6P40645 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC15.88■□□□□ 0.13
Sox6P40645 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sox6P40645 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC15.88■□□□□ 0.13
Sox6P40645 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sox6P40645 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sox6P40645 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sox6P40645 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Sox6P40645 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sox6P40645 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Sox6P40645 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC15.88■□□□□ 0.13
Sox6P40645 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Sox6P40645 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sox6P40645 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC15.87■□□□□ 0.13
Sox6P40645 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sox6P40645 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sox6P40645 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC15.87■□□□□ 0.13
Sox6P40645 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sox6P40645 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sox6P40645 Dancr-204ENSMUST00000132389 2347 ntBASIC15.87■□□□□ 0.13
Sox6P40645 Gm10418-201ENSMUST00000100943 576 ntBASIC15.87■□□□□ 0.13
Sox6P40645 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC15.87■□□□□ 0.13
Sox6P40645 Gm29241-201ENSMUST00000189260 1096 ntBASIC15.87■□□□□ 0.13
Sox6P40645 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC15.87■□□□□ 0.13
Sox6P40645 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sox6P40645 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sox6P40645 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC15.87■□□□□ 0.13
Sox6P40645 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sox6P40645 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sox6P40645 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sox6P40645 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sox6P40645 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sox6P40645 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sox6P40645 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sox6P40645 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sox6P40645 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sox6P40645 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sox6P40645 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sox6P40645 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC15.86■□□□□ 0.13
Sox6P40645 Gm45560-201ENSMUST00000211492 1472 ntBASIC15.86■□□□□ 0.13
Sox6P40645 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sox6P40645 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC15.86■□□□□ 0.13
Sox6P40645 Mir2861-201ENSMUST00000175539 82 ntBASIC15.86■□□□□ 0.13
Sox6P40645 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC15.86■□□□□ 0.13
Sox6P40645 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC15.86■□□□□ 0.13
Sox6P40645 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sox6P40645 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sox6P40645 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
Sox6P40645 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sox6P40645 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC15.86■□□□□ 0.13
Sox6P40645 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Sox6P40645 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sox6P40645 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Sox6P40645 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC15.85■□□□□ 0.13
Sox6P40645 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC15.85■□□□□ 0.13
Sox6P40645 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sox6P40645 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms