Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Fen1P39749 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Fen1P39749 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Fen1P39749 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Fen1P39749 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.04■□□□□ 0.32
Fen1P39749 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Fen1P39749 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Fen1P39749 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Fen1P39749 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Fen1P39749 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Fen1P39749 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Fen1P39749 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.04■□□□□ 0.32
Fen1P39749 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Fen1P39749 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Fen1P39749 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC17.04■□□□□ 0.32
Fen1P39749 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Fen1P39749 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Fen1P39749 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.04■□□□□ 0.32
Fen1P39749 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Fen1P39749 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Fen1P39749 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Fen1P39749 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Fen1P39749 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Fen1P39749 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Fen1P39749 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Fen1P39749 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Fen1P39749 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Fen1P39749 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Fen1P39749 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Fen1P39749 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Fen1P39749 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Fen1P39749 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Fen1P39749 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.03■□□□□ 0.32
Fen1P39749 Gm13401-201ENSMUST00000117074 291 ntBASIC17.03■□□□□ 0.32
Fen1P39749 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Fen1P39749 Gm6211-202ENSMUST00000167849 925 ntBASIC17.03■□□□□ 0.32
Fen1P39749 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.03■□□□□ 0.32
Fen1P39749 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Fen1P39749 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17.03■□□□□ 0.32
Fen1P39749 Flg-201ENSMUST00000050758 1488 ntBASIC17.03■□□□□ 0.32
Fen1P39749 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Fen1P39749 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Fen1P39749 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Fen1P39749 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC17.02■□□□□ 0.32
Fen1P39749 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Fen1P39749 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Fen1P39749 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC17.02■□□□□ 0.32
Fen1P39749 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Fen1P39749 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC17.02■□□□□ 0.32
Fen1P39749 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Fen1P39749 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Fen1P39749 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.02■□□□□ 0.32
Fen1P39749 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.02■□□□□ 0.32
Fen1P39749 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
Fen1P39749 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.02■□□□□ 0.32
Fen1P39749 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.02■□□□□ 0.32
Fen1P39749 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Fen1P39749 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Fen1P39749 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Fen1P39749 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Fen1P39749 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Fen1P39749 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Fen1P39749 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Fen1P39749 CT010478.1-201ENSMUST00000220747 2787 ntBASIC17.02■□□□□ 0.31
Fen1P39749 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Fen1P39749 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Fen1P39749 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Fen1P39749 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Fen1P39749 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Fen1P39749 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Fen1P39749 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Fen1P39749 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Fen1P39749 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Fen1P39749 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Fen1P39749 Dancr-204ENSMUST00000132389 2347 ntBASIC17.01■□□□□ 0.31
Fen1P39749 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.01■□□□□ 0.31
Fen1P39749 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.01■□□□□ 0.31
Fen1P39749 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Fen1P39749 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Fen1P39749 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Fen1P39749 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Fen1P39749 Gm44549-201ENSMUST00000208351 577 ntBASIC17.01■□□□□ 0.31
Fen1P39749 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.01■□□□□ 0.31
Fen1P39749 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Fen1P39749 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Fen1P39749 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.01■□□□□ 0.31
Fen1P39749 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Fen1P39749 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC17.01■□□□□ 0.31
Fen1P39749 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Fen1P39749 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Fen1P39749 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Fen1P39749 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Fen1P39749 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.01■□□□□ 0.31
Fen1P39749 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Fen1P39749 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Fen1P39749 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Fen1P39749 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Fen1P39749 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Fen1P39749 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Fen1P39749 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms