Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LdlrP35951 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC16.84■□□□□ 0.29
LdlrP35951 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LdlrP35951 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LdlrP35951 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
LdlrP35951 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LdlrP35951 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
LdlrP35951 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
LdlrP35951 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
LdlrP35951 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
LdlrP35951 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
LdlrP35951 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.83■□□□□ 0.28
LdlrP35951 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LdlrP35951 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LdlrP35951 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LdlrP35951 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
LdlrP35951 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
LdlrP35951 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.83■□□□□ 0.28
LdlrP35951 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
LdlrP35951 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.83■□□□□ 0.28
LdlrP35951 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LdlrP35951 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
LdlrP35951 AC163280.1-201ENSMUST00000228194 1100 ntBASIC16.83■□□□□ 0.28
LdlrP35951 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LdlrP35951 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LdlrP35951 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LdlrP35951 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LdlrP35951 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LdlrP35951 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LdlrP35951 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LdlrP35951 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LdlrP35951 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LdlrP35951 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LdlrP35951 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LdlrP35951 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LdlrP35951 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LdlrP35951 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LdlrP35951 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LdlrP35951 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
LdlrP35951 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LdlrP35951 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LdlrP35951 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LdlrP35951 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LdlrP35951 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LdlrP35951 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LdlrP35951 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LdlrP35951 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
LdlrP35951 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
LdlrP35951 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
LdlrP35951 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LdlrP35951 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LdlrP35951 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LdlrP35951 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LdlrP35951 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
LdlrP35951 Mir5122-201ENSMUST00000175004 89 ntBASIC16.81■□□□□ 0.28
LdlrP35951 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC16.81■□□□□ 0.28
LdlrP35951 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LdlrP35951 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LdlrP35951 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LdlrP35951 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
LdlrP35951 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LdlrP35951 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LdlrP35951 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LdlrP35951 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LdlrP35951 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
LdlrP35951 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LdlrP35951 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
LdlrP35951 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LdlrP35951 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LdlrP35951 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LdlrP35951 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LdlrP35951 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LdlrP35951 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
LdlrP35951 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LdlrP35951 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
LdlrP35951 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LdlrP35951 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LdlrP35951 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LdlrP35951 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LdlrP35951 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LdlrP35951 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
LdlrP35951 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.8■□□□□ 0.28
LdlrP35951 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC16.8■□□□□ 0.28
LdlrP35951 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC16.8■□□□□ 0.28
LdlrP35951 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LdlrP35951 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LdlrP35951 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LdlrP35951 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LdlrP35951 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LdlrP35951 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.8■□□□□ 0.28
LdlrP35951 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LdlrP35951 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LdlrP35951 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LdlrP35951 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
LdlrP35951 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LdlrP35951 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LdlrP35951 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
LdlrP35951 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LdlrP35951 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
LdlrP35951 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms