Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Mmp13P33435 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Mmp13P33435 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Mmp13P33435 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp13P33435 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Mmp13P33435 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp13P33435 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp13P33435 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC17.31■□□□□ 0.36
Mmp13P33435 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp13P33435 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp13P33435 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Mmp13P33435 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp13P33435 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Mmp13P33435 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp13P33435 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mmp13P33435 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Mmp13P33435 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mmp13P33435 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
Mmp13P33435 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mmp13P33435 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mmp13P33435 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mmp13P33435 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mmp13P33435 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mmp13P33435 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Mmp13P33435 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Mmp13P33435 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
Mmp13P33435 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mmp13P33435 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.3■□□□□ 0.36
Mmp13P33435 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.3■□□□□ 0.36
Mmp13P33435 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Mmp13P33435 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.3■□□□□ 0.36
Mmp13P33435 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mmp13P33435 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mmp13P33435 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mmp13P33435 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Mmp13P33435 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mmp13P33435 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mmp13P33435 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Mmp13P33435 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mmp13P33435 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mmp13P33435 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mmp13P33435 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Mmp13P33435 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Mmp13P33435 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Mmp13P33435 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mmp13P33435 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
Mmp13P33435 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.29■□□□□ 0.36
Mmp13P33435 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mmp13P33435 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
Mmp13P33435 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mmp13P33435 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mmp13P33435 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mmp13P33435 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.29■□□□□ 0.36
Mmp13P33435 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.29■□□□□ 0.36
Mmp13P33435 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Mmp13P33435 Gm37292-201ENSMUST00000192062 758 ntBASIC17.29■□□□□ 0.36
Mmp13P33435 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mmp13P33435 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mmp13P33435 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mmp13P33435 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Mmp13P33435 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Mmp13P33435 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Mmp13P33435 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Mmp13P33435 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
Mmp13P33435 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mmp13P33435 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mmp13P33435 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mmp13P33435 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mmp13P33435 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mmp13P33435 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mmp13P33435 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mmp13P33435 Mir6982-201ENSMUST00000184354 68 ntBASIC17.28■□□□□ 0.36
Mmp13P33435 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.28■□□□□ 0.36
Mmp13P33435 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mmp13P33435 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
Mmp13P33435 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mmp13P33435 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mmp13P33435 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Mmp13P33435 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mmp13P33435 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mmp13P33435 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mmp13P33435 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.28■□□□□ 0.36
Mmp13P33435 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Mmp13P33435 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mmp13P33435 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Mmp13P33435 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Mmp13P33435 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
Mmp13P33435 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Mmp13P33435 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Mmp13P33435 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Mmp13P33435 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Mmp13P33435 Gm715-201ENSMUST00000117865 831 ntBASIC17.27■□□□□ 0.36
Mmp13P33435 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Mmp13P33435 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Mmp13P33435 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Mmp13P33435 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.27■□□□□ 0.36
Mmp13P33435 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Mmp13P33435 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Mmp13P33435 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Mmp13P33435 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms