Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Mmp13P33435 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Mmp13P33435 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Mmp13P33435 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp13P33435 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Mmp13P33435 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp13P33435 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp13P33435 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC17.31■□□□□ 0.36
Mmp13P33435 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp13P33435 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp13P33435 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Mmp13P33435 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp13P33435 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Mmp13P33435 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp13P33435 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mmp13P33435 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Mmp13P33435 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mmp13P33435 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
Mmp13P33435 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mmp13P33435 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mmp13P33435 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mmp13P33435 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mmp13P33435 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mmp13P33435 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Mmp13P33435 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Mmp13P33435 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
Mmp13P33435 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mmp13P33435 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.3■□□□□ 0.36
Mmp13P33435 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.3■□□□□ 0.36
Mmp13P33435 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Mmp13P33435 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.3■□□□□ 0.36
Mmp13P33435 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mmp13P33435 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mmp13P33435 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mmp13P33435 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Mmp13P33435 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mmp13P33435 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mmp13P33435 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Mmp13P33435 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mmp13P33435 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mmp13P33435 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mmp13P33435 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Mmp13P33435 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Mmp13P33435 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Mmp13P33435 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mmp13P33435 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
Mmp13P33435 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.29■□□□□ 0.36
Mmp13P33435 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mmp13P33435 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
Mmp13P33435 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mmp13P33435 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mmp13P33435 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mmp13P33435 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.29■□□□□ 0.36
Mmp13P33435 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.29■□□□□ 0.36
Mmp13P33435 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Mmp13P33435 Gm37292-201ENSMUST00000192062 758 ntBASIC17.29■□□□□ 0.36
Mmp13P33435 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mmp13P33435 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mmp13P33435 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mmp13P33435 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Mmp13P33435 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Mmp13P33435 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Mmp13P33435 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Mmp13P33435 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
Mmp13P33435 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mmp13P33435 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mmp13P33435 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mmp13P33435 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mmp13P33435 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mmp13P33435 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mmp13P33435 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mmp13P33435 Mir6982-201ENSMUST00000184354 68 ntBASIC17.28■□□□□ 0.36
Mmp13P33435 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.28■□□□□ 0.36
Mmp13P33435 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mmp13P33435 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
Mmp13P33435 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mmp13P33435 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mmp13P33435 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Mmp13P33435 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mmp13P33435 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mmp13P33435 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mmp13P33435 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.28■□□□□ 0.36
Mmp13P33435 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Mmp13P33435 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mmp13P33435 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Mmp13P33435 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Mmp13P33435 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
Mmp13P33435 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Mmp13P33435 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Mmp13P33435 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Mmp13P33435 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Mmp13P33435 Gm715-201ENSMUST00000117865 831 ntBASIC17.27■□□□□ 0.36
Mmp13P33435 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Mmp13P33435 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Mmp13P33435 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Mmp13P33435 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.27■□□□□ 0.36
Mmp13P33435 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Mmp13P33435 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Mmp13P33435 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Mmp13P33435 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms