Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccl6P27784 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccl6P27784 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccl6P27784 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccl6P27784 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccl6P27784 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccl6P27784 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ccl6P27784 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccl6P27784 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccl6P27784 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccl6P27784 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ccl6P27784 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Ccl6P27784 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccl6P27784 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Ccl6P27784 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccl6P27784 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccl6P27784 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccl6P27784 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC13.19□□□□□ -0.3
Ccl6P27784 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ccl6P27784 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccl6P27784 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
Ccl6P27784 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC13.19□□□□□ -0.3
Ccl6P27784 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccl6P27784 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ccl6P27784 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccl6P27784 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Ccl6P27784 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ccl6P27784 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccl6P27784 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ccl6P27784 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccl6P27784 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccl6P27784 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccl6P27784 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccl6P27784 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccl6P27784 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccl6P27784 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccl6P27784 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccl6P27784 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC13.18□□□□□ -0.3
Ccl6P27784 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC13.18□□□□□ -0.3
Ccl6P27784 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccl6P27784 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccl6P27784 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccl6P27784 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccl6P27784 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC13.18□□□□□ -0.3
Ccl6P27784 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC13.18□□□□□ -0.3
Ccl6P27784 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccl6P27784 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ccl6P27784 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccl6P27784 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccl6P27784 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Ccl6P27784 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ccl6P27784 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccl6P27784 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Ccl6P27784 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccl6P27784 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccl6P27784 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccl6P27784 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccl6P27784 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC13.17□□□□□ -0.3
Ccl6P27784 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccl6P27784 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccl6P27784 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccl6P27784 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
Ccl6P27784 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccl6P27784 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccl6P27784 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccl6P27784 Gm16042-201ENSMUST00000204813 1247 ntBASIC13.17□□□□□ -0.3
Ccl6P27784 AC175538.1-201ENSMUST00000225343 1269 ntBASIC13.17□□□□□ -0.3
Ccl6P27784 Arhgef33-211ENSMUST00000225658 473 ntBASIC13.17□□□□□ -0.3
Ccl6P27784 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccl6P27784 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccl6P27784 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Ccl6P27784 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccl6P27784 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccl6P27784 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccl6P27784 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccl6P27784 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccl6P27784 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccl6P27784 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccl6P27784 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccl6P27784 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccl6P27784 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccl6P27784 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccl6P27784 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccl6P27784 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccl6P27784 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
Ccl6P27784 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccl6P27784 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccl6P27784 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccl6P27784 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC13.16□□□□□ -0.3
Ccl6P27784 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccl6P27784 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccl6P27784 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC13.16□□□□□ -0.3
Ccl6P27784 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC13.16□□□□□ -0.3
Ccl6P27784 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC13.16□□□□□ -0.3
Ccl6P27784 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccl6P27784 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Ccl6P27784 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccl6P27784 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccl6P27784 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccl6P27784 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms