Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Tnfrsf1bP25119 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC15.68■□□□□ 0.1
Tnfrsf1bP25119 Gm27000-201ENSMUST00000182943 842 ntBASIC15.68■□□□□ 0.1
Tnfrsf1bP25119 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC15.68■□□□□ 0.1
Tnfrsf1bP25119 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tnfrsf1bP25119 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Tnfrsf1bP25119 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tnfrsf1bP25119 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tnfrsf1bP25119 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tnfrsf1bP25119 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Tnfrsf1bP25119 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Tnfrsf1bP25119 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Tnfrsf1bP25119 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tnfrsf1bP25119 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tnfrsf1bP25119 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tnfrsf1bP25119 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tnfrsf1bP25119 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tnfrsf1bP25119 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tnfrsf1bP25119 Tfap2a-209ENSMUST00000225180 1828 ntBASIC15.67■□□□□ 0.1
Tnfrsf1bP25119 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC15.67■□□□□ 0.1
Tnfrsf1bP25119 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC15.67■□□□□ 0.1
Tnfrsf1bP25119 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC15.67■□□□□ 0.1
Tnfrsf1bP25119 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Tnfrsf1bP25119 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC15.67■□□□□ 0.1
Tnfrsf1bP25119 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tnfrsf1bP25119 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tnfrsf1bP25119 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Tnfrsf1bP25119 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tnfrsf1bP25119 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tnfrsf1bP25119 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tnfrsf1bP25119 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tnfrsf1bP25119 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Tnfrsf1bP25119 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfrsf1bP25119 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfrsf1bP25119 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Tnfrsf1bP25119 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfrsf1bP25119 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfrsf1bP25119 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Tnfrsf1bP25119 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfrsf1bP25119 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfrsf1bP25119 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfrsf1bP25119 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfrsf1bP25119 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfrsf1bP25119 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfrsf1bP25119 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfrsf1bP25119 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC15.66■□□□□ 0.1
Tnfrsf1bP25119 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfrsf1bP25119 Spsb2-203ENSMUST00000112473 1322 ntBASIC15.66■□□□□ 0.1
Tnfrsf1bP25119 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC15.66■□□□□ 0.1
Tnfrsf1bP25119 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tnfrsf1bP25119 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tnfrsf1bP25119 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tnfrsf1bP25119 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Tnfrsf1bP25119 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Tnfrsf1bP25119 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tnfrsf1bP25119 Gm10231-201ENSMUST00000181584 441 ntBASIC15.65■□□□□ 0.1
Tnfrsf1bP25119 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tnfrsf1bP25119 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Tnfrsf1bP25119 Gm10175-202ENSMUST00000208752 441 ntBASIC15.65■□□□□ 0.1
Tnfrsf1bP25119 AC158538.1-201ENSMUST00000225870 294 ntBASIC15.65■□□□□ 0.1
Tnfrsf1bP25119 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Tnfrsf1bP25119 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tnfrsf1bP25119 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Tnfrsf1bP25119 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Tnfrsf1bP25119 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Tnfrsf1bP25119 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tnfrsf1bP25119 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tnfrsf1bP25119 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Tnfrsf1bP25119 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tnfrsf1bP25119 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Tnfrsf1bP25119 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
Tnfrsf1bP25119 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tnfrsf1bP25119 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tnfrsf1bP25119 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tnfrsf1bP25119 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Tnfrsf1bP25119 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Tnfrsf1bP25119 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Tnfrsf1bP25119 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tnfrsf1bP25119 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tnfrsf1bP25119 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Tnfrsf1bP25119 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tnfrsf1bP25119 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tnfrsf1bP25119 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Tnfrsf1bP25119 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tnfrsf1bP25119 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC15.64■□□□□ 0.09
Tnfrsf1bP25119 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tnfrsf1bP25119 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Tnfrsf1bP25119 AC121577.1-201ENSMUST00000227302 707 ntBASIC15.64■□□□□ 0.09
Tnfrsf1bP25119 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tnfrsf1bP25119 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tnfrsf1bP25119 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Tnfrsf1bP25119 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC15.64■□□□□ 0.09
Tnfrsf1bP25119 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Tnfrsf1bP25119 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tnfrsf1bP25119 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC15.63■□□□□ 0.09
Tnfrsf1bP25119 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tnfrsf1bP25119 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Tnfrsf1bP25119 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Tnfrsf1bP25119 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
Tnfrsf1bP25119 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms