Protein–RNA interactions for Protein: P16388

Kcna1, Potassium voltage-gated channel subfamily A member 1, mousemouse

Predictions only

Length 495 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcna1P16388 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Kcna1P16388 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Kcna1P16388 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC19.18■□□□□ 0.66
Kcna1P16388 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Kcna1P16388 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Kcna1P16388 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Kcna1P16388 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Kcna1P16388 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Kcna1P16388 Gm45203-201ENSMUST00000206384 1831 ntBASIC19.18■□□□□ 0.66
Kcna1P16388 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Kcna1P16388 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Kcna1P16388 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Kcna1P16388 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Kcna1P16388 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC19.17■□□□□ 0.66
Kcna1P16388 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC19.17■□□□□ 0.66
Kcna1P16388 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Kcna1P16388 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
Kcna1P16388 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Kcna1P16388 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Kcna1P16388 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC19.17■□□□□ 0.66
Kcna1P16388 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Kcna1P16388 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Kcna1P16388 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Kcna1P16388 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Kcna1P16388 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Kcna1P16388 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Kcna1P16388 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC19.17■□□□□ 0.66
Kcna1P16388 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Kcna1P16388 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Kcna1P16388 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Kcna1P16388 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Kcna1P16388 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Kcna1P16388 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Kcna1P16388 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Kcna1P16388 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Kcna1P16388 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Kcna1P16388 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Kcna1P16388 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC19.16■□□□□ 0.66
Kcna1P16388 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Kcna1P16388 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Kcna1P16388 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Kcna1P16388 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Kcna1P16388 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC19.16■□□□□ 0.66
Kcna1P16388 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC19.16■□□□□ 0.66
Kcna1P16388 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Kcna1P16388 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Kcna1P16388 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Kcna1P16388 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Kcna1P16388 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC19.16■□□□□ 0.66
Kcna1P16388 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Kcna1P16388 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Kcna1P16388 Gm5898-201ENSMUST00000121016 2071 ntBASIC19.16■□□□□ 0.66
Kcna1P16388 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Kcna1P16388 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Kcna1P16388 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC19.16■□□□□ 0.66
Kcna1P16388 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.16■□□□□ 0.66
Kcna1P16388 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Kcna1P16388 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.16■□□□□ 0.66
Kcna1P16388 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC19.16■□□□□ 0.66
Kcna1P16388 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Kcna1P16388 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Kcna1P16388 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Kcna1P16388 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Kcna1P16388 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Kcna1P16388 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Kcna1P16388 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Kcna1P16388 Gm11355-201ENSMUST00000121120 306 ntBASIC19.15■□□□□ 0.66
Kcna1P16388 Gm37722-201ENSMUST00000193757 208 ntBASIC19.15■□□□□ 0.66
Kcna1P16388 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Kcna1P16388 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Kcna1P16388 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Kcna1P16388 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC19.15■□□□□ 0.66
Kcna1P16388 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Kcna1P16388 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Kcna1P16388 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Kcna1P16388 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Kcna1P16388 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Kcna1P16388 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Kcna1P16388 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.14■□□□□ 0.66
Kcna1P16388 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Kcna1P16388 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Kcna1P16388 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Kcna1P16388 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
Kcna1P16388 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Kcna1P16388 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Kcna1P16388 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Kcna1P16388 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Kcna1P16388 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Kcna1P16388 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC19.14■□□□□ 0.65
Kcna1P16388 Gm42900-201ENSMUST00000197184 2167 ntBASIC19.14■□□□□ 0.65
Kcna1P16388 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Kcna1P16388 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Kcna1P16388 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Kcna1P16388 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Kcna1P16388 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Kcna1P16388 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Kcna1P16388 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Kcna1P16388 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC19.13■□□□□ 0.65
Kcna1P16388 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Kcna1P16388 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms