Protein–RNA interactions for Protein: P11276

Fn1, Fibronectin, mousemouse

Known RBP Predictions only

Length 2,477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fn1P11276 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Fn1P11276 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Fn1P11276 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Fn1P11276 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Fn1P11276 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Fn1P11276 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Fn1P11276 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Fn1P11276 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC12.98□□□□□ -0.33
Fn1P11276 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC12.98□□□□□ -0.33
Fn1P11276 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC12.98□□□□□ -0.33
Fn1P11276 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC12.98□□□□□ -0.33
Fn1P11276 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Fn1P11276 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC12.98□□□□□ -0.33
Fn1P11276 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Fn1P11276 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Fn1P11276 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Fn1P11276 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Fn1P11276 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Fn1P11276 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Fn1P11276 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Fn1P11276 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Fn1P11276 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Fn1P11276 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Fn1P11276 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Fn1P11276 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Fn1P11276 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Fn1P11276 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Fn1P11276 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Fn1P11276 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Fn1P11276 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Fn1P11276 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC12.98□□□□□ -0.33
Fn1P11276 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC12.98□□□□□ -0.33
Fn1P11276 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
Fn1P11276 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Fn1P11276 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Fn1P11276 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Fn1P11276 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC12.97□□□□□ -0.33
Fn1P11276 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC12.97□□□□□ -0.33
Fn1P11276 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Fn1P11276 AC155729.1-201ENSMUST00000227758 544 ntBASIC12.97□□□□□ -0.33
Fn1P11276 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Fn1P11276 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Fn1P11276 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Fn1P11276 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Fn1P11276 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Fn1P11276 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC12.97□□□□□ -0.33
Fn1P11276 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Fn1P11276 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Fn1P11276 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Fn1P11276 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC12.97□□□□□ -0.33
Fn1P11276 Gm27494-201ENSMUST00000184735 189 ntBASIC12.97□□□□□ -0.33
Fn1P11276 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC12.97□□□□□ -0.33
Fn1P11276 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Fn1P11276 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC12.97□□□□□ -0.33
Fn1P11276 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Fn1P11276 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Fn1P11276 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Fn1P11276 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Fn1P11276 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Fn1P11276 Gm9885-202ENSMUST00000186234 2209 ntBASIC12.97□□□□□ -0.33
Fn1P11276 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Fn1P11276 Wnt10b-204ENSMUST00000226655 1807 ntBASIC12.96□□□□□ -0.33
Fn1P11276 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Fn1P11276 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Fn1P11276 Gm7222-201ENSMUST00000117512 906 ntBASIC12.96□□□□□ -0.33
Fn1P11276 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Fn1P11276 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Fn1P11276 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Fn1P11276 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
Fn1P11276 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Fn1P11276 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Fn1P11276 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Fn1P11276 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Fn1P11276 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Fn1P11276 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Fn1P11276 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Fn1P11276 Gm12497-201ENSMUST00000138778 237 ntBASIC12.96□□□□□ -0.34
Fn1P11276 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Fn1P11276 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Fn1P11276 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Fn1P11276 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Fn1P11276 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Fn1P11276 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Fn1P11276 Gm11873-201ENSMUST00000117877 1304 ntBASIC12.95□□□□□ -0.34
Fn1P11276 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Fn1P11276 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Fn1P11276 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Fn1P11276 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Fn1P11276 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC12.95□□□□□ -0.34
Fn1P11276 Gm25745-201ENSMUST00000174945 133 ntBASIC12.95□□□□□ -0.34
Fn1P11276 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC12.95□□□□□ -0.34
Fn1P11276 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Fn1P11276 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Fn1P11276 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Fn1P11276 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
Fn1P11276 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Fn1P11276 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Fn1P11276 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Fn1P11276 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Fn1P11276 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms