Protein–RNA interactions for Protein: P0DN34

Ndufb1, NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 1, mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufb1P0DN34 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ndufb1P0DN34 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Ndufb1P0DN34 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ndufb1P0DN34 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC9.4□□□□□ -0.9
Ndufb1P0DN34 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Ndufb1P0DN34 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ndufb1P0DN34 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Ndufb1P0DN34 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ndufb1P0DN34 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC9.4□□□□□ -0.9
Ndufb1P0DN34 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ndufb1P0DN34 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.9
Ndufb1P0DN34 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ndufb1P0DN34 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Ndufb1P0DN34 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.9
Ndufb1P0DN34 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ndufb1P0DN34 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ndufb1P0DN34 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Ndufb1P0DN34 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Ndufb1P0DN34 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Ndufb1P0DN34 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Ndufb1P0DN34 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Ndufb1P0DN34 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.91
Ndufb1P0DN34 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.91
Ndufb1P0DN34 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Ndufb1P0DN34 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Ndufb1P0DN34 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC9.4□□□□□ -0.91
Ndufb1P0DN34 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Ndufb1P0DN34 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Ndufb1P0DN34 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Ndufb1P0DN34 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Ndufb1P0DN34 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Ndufb1P0DN34 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Ndufb1P0DN34 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.91
Ndufb1P0DN34 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.91
Ndufb1P0DN34 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Ndufb1P0DN34 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ndufb1P0DN34 AC148324.1-201ENSMUST00000219034 4240 ntBASIC9.39□□□□□ -0.91
Ndufb1P0DN34 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ndufb1P0DN34 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC9.39□□□□□ -0.91
Ndufb1P0DN34 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Ndufb1P0DN34 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ndufb1P0DN34 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ndufb1P0DN34 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ndufb1P0DN34 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ndufb1P0DN34 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Ndufb1P0DN34 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ndufb1P0DN34 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ndufb1P0DN34 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ndufb1P0DN34 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ndufb1P0DN34 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Ndufb1P0DN34 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Ndufb1P0DN34 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
Ndufb1P0DN34 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Ndufb1P0DN34 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Ndufb1P0DN34 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Ndufb1P0DN34 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC9.39□□□□□ -0.91
Ndufb1P0DN34 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Ndufb1P0DN34 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Ndufb1P0DN34 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Ndufb1P0DN34 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC9.39□□□□□ -0.91
Ndufb1P0DN34 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ndufb1P0DN34 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC9.39□□□□□ -0.91
Ndufb1P0DN34 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Ndufb1P0DN34 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Ndufb1P0DN34 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ndufb1P0DN34 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ndufb1P0DN34 AC133083.1-201ENSMUST00000221736 2209 ntBASIC9.39□□□□□ -0.91
Ndufb1P0DN34 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ndufb1P0DN34 Gm9194-201ENSMUST00000220749 1447 ntBASIC9.39□□□□□ -0.91
Ndufb1P0DN34 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
Ndufb1P0DN34 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC9.39□□□□□ -0.91
Ndufb1P0DN34 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ndufb1P0DN34 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ndufb1P0DN34 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ndufb1P0DN34 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ndufb1P0DN34 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ndufb1P0DN34 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ndufb1P0DN34 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ndufb1P0DN34 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ndufb1P0DN34 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Ndufb1P0DN34 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ndufb1P0DN34 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ndufb1P0DN34 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ndufb1P0DN34 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ndufb1P0DN34 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ndufb1P0DN34 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ndufb1P0DN34 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ndufb1P0DN34 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ndufb1P0DN34 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ndufb1P0DN34 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ndufb1P0DN34 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Ndufb1P0DN34 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ndufb1P0DN34 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ndufb1P0DN34 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC9.38□□□□□ -0.91
Ndufb1P0DN34 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Ndufb1P0DN34 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
Ndufb1P0DN34 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ndufb1P0DN34 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC9.38□□□□□ -0.91
Ndufb1P0DN34 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Ndufb1P0DN34 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms