Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Chmp6P0C0A3 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Chmp6P0C0A3 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.42■□□□□ 0.54
Chmp6P0C0A3 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Chmp6P0C0A3 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Chmp6P0C0A3 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Chmp6P0C0A3 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC18.42■□□□□ 0.54
Chmp6P0C0A3 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Chmp6P0C0A3 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Chmp6P0C0A3 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18.42■□□□□ 0.54
Chmp6P0C0A3 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Chmp6P0C0A3 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Chmp6P0C0A3 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.42■□□□□ 0.54
Chmp6P0C0A3 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Chmp6P0C0A3 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Chmp6P0C0A3 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Chmp6P0C0A3 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Chmp6P0C0A3 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Chmp6P0C0A3 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Chmp6P0C0A3 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Chmp6P0C0A3 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Chmp6P0C0A3 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
Chmp6P0C0A3 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Chmp6P0C0A3 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Chmp6P0C0A3 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Chmp6P0C0A3 Gm7638-201ENSMUST00000121348 967 ntBASIC18.41■□□□□ 0.54
Chmp6P0C0A3 AC153881.2-201ENSMUST00000214877 204 ntBASIC18.41■□□□□ 0.54
Chmp6P0C0A3 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.41■□□□□ 0.54
Chmp6P0C0A3 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Chmp6P0C0A3 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Chmp6P0C0A3 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Chmp6P0C0A3 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC18.41■□□□□ 0.54
Chmp6P0C0A3 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Chmp6P0C0A3 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Chmp6P0C0A3 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Chmp6P0C0A3 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Chmp6P0C0A3 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Chmp6P0C0A3 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Chmp6P0C0A3 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Chmp6P0C0A3 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Chmp6P0C0A3 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Chmp6P0C0A3 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Chmp6P0C0A3 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC18.4■□□□□ 0.54
Chmp6P0C0A3 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Chmp6P0C0A3 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Chmp6P0C0A3 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Chmp6P0C0A3 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Chmp6P0C0A3 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Chmp6P0C0A3 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Chmp6P0C0A3 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Chmp6P0C0A3 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Chmp6P0C0A3 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
Chmp6P0C0A3 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Chmp6P0C0A3 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
Chmp6P0C0A3 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chmp6P0C0A3 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chmp6P0C0A3 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Chmp6P0C0A3 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chmp6P0C0A3 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chmp6P0C0A3 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chmp6P0C0A3 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.39■□□□□ 0.53
Chmp6P0C0A3 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chmp6P0C0A3 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chmp6P0C0A3 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Chmp6P0C0A3 Gm27463-201ENSMUST00000183569 57 ntBASIC18.39■□□□□ 0.53
Chmp6P0C0A3 Gm43799-201ENSMUST00000201845 579 ntBASIC18.39■□□□□ 0.53
Chmp6P0C0A3 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chmp6P0C0A3 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chmp6P0C0A3 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chmp6P0C0A3 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chmp6P0C0A3 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Chmp6P0C0A3 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chmp6P0C0A3 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Chmp6P0C0A3 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC18.39■□□□□ 0.53
Chmp6P0C0A3 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Chmp6P0C0A3 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
Chmp6P0C0A3 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp6P0C0A3 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp6P0C0A3 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp6P0C0A3 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.38■□□□□ 0.53
Chmp6P0C0A3 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp6P0C0A3 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Chmp6P0C0A3 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.38■□□□□ 0.53
Chmp6P0C0A3 Gm11539-201ENSMUST00000119837 557 ntBASIC18.38■□□□□ 0.53
Chmp6P0C0A3 Gm13436-201ENSMUST00000120418 567 ntBASIC18.38■□□□□ 0.53
Chmp6P0C0A3 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp6P0C0A3 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC18.38■□□□□ 0.53
Chmp6P0C0A3 Gm37025-201ENSMUST00000195159 829 ntBASIC18.38■□□□□ 0.53
Chmp6P0C0A3 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp6P0C0A3 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp6P0C0A3 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp6P0C0A3 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp6P0C0A3 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
Chmp6P0C0A3 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp6P0C0A3 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp6P0C0A3 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp6P0C0A3 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp6P0C0A3 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Chmp6P0C0A3 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp6P0C0A3 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms