Protein–RNA interactions for Protein: P01808

Ig heavy chain V region T601, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01808 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
P01808 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
P01808 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
P01808 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
P01808 Gm45058-201ENSMUST00000205810 766 ntBASIC15.31■□□□□ 0.04
P01808 Spsb2-203ENSMUST00000112473 1322 ntBASIC15.31■□□□□ 0.04
P01808 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
P01808 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
P01808 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC15.31■□□□□ 0.04
P01808 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
P01808 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
P01808 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
P01808 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
P01808 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
P01808 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
P01808 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
P01808 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
P01808 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
P01808 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
P01808 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
P01808 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
P01808 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
P01808 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC15.3■□□□□ 0.04
P01808 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
P01808 Mir5130-201ENSMUST00000175160 84 ntBASIC15.3■□□□□ 0.04
P01808 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
P01808 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
P01808 Gm29994-201ENSMUST00000195495 1193 ntBASIC15.3■□□□□ 0.04
P01808 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
P01808 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC15.3■□□□□ 0.04
P01808 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC15.3■□□□□ 0.04
P01808 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
P01808 Gm9987-201ENSMUST00000069768 567 ntBASIC15.3■□□□□ 0.04
P01808 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
P01808 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
P01808 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC15.3■□□□□ 0.04
P01808 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
P01808 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
P01808 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
P01808 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
P01808 Gm9954-202ENSMUST00000198686 4725 ntBASIC15.29■□□□□ 0.04
P01808 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
P01808 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
P01808 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
P01808 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
P01808 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
P01808 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
P01808 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
P01808 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
P01808 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
P01808 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
P01808 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
P01808 Gm13474-201ENSMUST00000122466 815 ntBASIC15.29■□□□□ 0.04
P01808 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC15.29■□□□□ 0.04
P01808 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC15.29■□□□□ 0.04
P01808 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
P01808 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
P01808 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
P01808 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
P01808 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
P01808 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
P01808 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
P01808 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
P01808 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
P01808 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
P01808 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
P01808 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
P01808 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
P01808 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
P01808 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
P01808 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
P01808 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC15.28■□□□□ 0.04
P01808 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
P01808 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
P01808 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC15.28■□□□□ 0.04
P01808 Gm7213-201ENSMUST00000215977 950 ntBASIC15.28■□□□□ 0.04
P01808 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC15.28■□□□□ 0.04
P01808 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC15.28■□□□□ 0.04
P01808 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
P01808 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
P01808 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
P01808 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
P01808 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
P01808 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
P01808 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
P01808 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
P01808 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
P01808 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
P01808 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
P01808 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
P01808 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
P01808 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
P01808 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
P01808 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
P01808 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
P01808 Gm3272-201ENSMUST00000181181 1229 ntBASIC15.27■□□□□ 0.04
P01808 Mir7071-201ENSMUST00000184847 69 ntBASIC15.27■□□□□ 0.04
P01808 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
P01808 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
P01808 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms