Protein–RNA interactions for Protein: P01727

Ig lambda-1 chain V region S43, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01727 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
P01727 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC13.5□□□□□ -0.25
P01727 Cxcl14-202ENSMUST00000224801 1467 ntBASIC13.5□□□□□ -0.25
P01727 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
P01727 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
P01727 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
P01727 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
P01727 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
P01727 Gm17807-201ENSMUST00000186869 298 ntBASIC13.5□□□□□ -0.25
P01727 Gm45328-201ENSMUST00000210942 917 ntBASIC13.5□□□□□ -0.25
P01727 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC13.5□□□□□ -0.25
P01727 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
P01727 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
P01727 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
P01727 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
P01727 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
P01727 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
P01727 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
P01727 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
P01727 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
P01727 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
P01727 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
P01727 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
P01727 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
P01727 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
P01727 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
P01727 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
P01727 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
P01727 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
P01727 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC13.49□□□□□ -0.25
P01727 Gm6623-201ENSMUST00000173570 544 ntBASIC13.49□□□□□ -0.25
P01727 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC13.49□□□□□ -0.25
P01727 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
P01727 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC13.49□□□□□ -0.25
P01727 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
P01727 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC13.49□□□□□ -0.25
P01727 Gm37811-201ENSMUST00000192416 2601 ntBASIC13.49□□□□□ -0.25
P01727 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
P01727 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
P01727 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
P01727 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
P01727 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
P01727 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
P01727 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
P01727 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
P01727 AC154855.1-201ENSMUST00000227353 1458 ntBASIC13.48□□□□□ -0.25
P01727 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
P01727 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
P01727 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
P01727 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
P01727 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
P01727 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
P01727 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
P01727 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
P01727 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC13.48□□□□□ -0.25
P01727 Ighv6-1-201ENSMUST00000193612 343 ntBASIC13.48□□□□□ -0.25
P01727 Gm37722-201ENSMUST00000193757 208 ntBASIC13.48□□□□□ -0.25
P01727 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC13.48□□□□□ -0.25
P01727 Gm18669-201ENSMUST00000216049 778 ntBASIC13.48□□□□□ -0.25
P01727 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC13.48□□□□□ -0.25
P01727 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
P01727 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
P01727 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
P01727 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
P01727 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
P01727 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
P01727 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
P01727 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
P01727 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
P01727 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
P01727 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
P01727 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
P01727 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
P01727 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC13.47□□□□□ -0.25
P01727 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
P01727 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
P01727 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
P01727 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
P01727 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
P01727 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
P01727 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
P01727 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC13.47□□□□□ -0.25
P01727 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
P01727 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
P01727 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
P01727 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
P01727 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
P01727 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
P01727 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
P01727 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
P01727 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
P01727 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
P01727 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
P01727 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
P01727 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
P01727 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
P01727 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
P01727 Gm11860-201ENSMUST00000122346 1010 ntBASIC13.46□□□□□ -0.25
P01727 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC13.46□□□□□ -0.25
P01727 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms