Protein–RNA interactions for Protein: P01575

Ifnb1, Interferon beta, mousemouse

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ifnb1P01575 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ifnb1P01575 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.84■□□□□ 0.45
Ifnb1P01575 Il3ra-202ENSMUST00000223589 738 ntBASIC17.84■□□□□ 0.45
Ifnb1P01575 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ifnb1P01575 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ifnb1P01575 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ifnb1P01575 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ifnb1P01575 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ifnb1P01575 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Ifnb1P01575 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ifnb1P01575 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.83■□□□□ 0.44
Ifnb1P01575 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Ifnb1P01575 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
Ifnb1P01575 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.83■□□□□ 0.44
Ifnb1P01575 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Ifnb1P01575 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ifnb1P01575 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Ifnb1P01575 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.83■□□□□ 0.44
Ifnb1P01575 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ifnb1P01575 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ifnb1P01575 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ifnb1P01575 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ifnb1P01575 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ifnb1P01575 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ifnb1P01575 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Ifnb1P01575 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
Ifnb1P01575 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ifnb1P01575 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ifnb1P01575 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ifnb1P01575 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ifnb1P01575 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Ifnb1P01575 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.82■□□□□ 0.44
Ifnb1P01575 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ifnb1P01575 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Ifnb1P01575 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Ifnb1P01575 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ifnb1P01575 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ifnb1P01575 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ifnb1P01575 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.82■□□□□ 0.44
Ifnb1P01575 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.82■□□□□ 0.44
Ifnb1P01575 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ifnb1P01575 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.82■□□□□ 0.44
Ifnb1P01575 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ifnb1P01575 Gm22240-201ENSMUST00000175225 82 ntBASIC17.82■□□□□ 0.44
Ifnb1P01575 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ifnb1P01575 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.82■□□□□ 0.44
Ifnb1P01575 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.82■□□□□ 0.44
Ifnb1P01575 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ifnb1P01575 Gm10812-201ENSMUST00000099864 546 ntBASIC17.82■□□□□ 0.44
Ifnb1P01575 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ifnb1P01575 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ifnb1P01575 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ifnb1P01575 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ifnb1P01575 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.81■□□□□ 0.44
Ifnb1P01575 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ifnb1P01575 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ifnb1P01575 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ifnb1P01575 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ifnb1P01575 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ifnb1P01575 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.81■□□□□ 0.44
Ifnb1P01575 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ifnb1P01575 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ifnb1P01575 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.81■□□□□ 0.44
Ifnb1P01575 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ifnb1P01575 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ifnb1P01575 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ifnb1P01575 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ifnb1P01575 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.81■□□□□ 0.44
Ifnb1P01575 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.81■□□□□ 0.44
Ifnb1P01575 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Ifnb1P01575 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.81■□□□□ 0.44
Ifnb1P01575 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.81■□□□□ 0.44
Ifnb1P01575 Gm7791-201ENSMUST00000219066 539 ntBASIC17.81■□□□□ 0.44
Ifnb1P01575 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.81■□□□□ 0.44
Ifnb1P01575 Odf3b-204ENSMUST00000227834 930 ntBASIC17.81■□□□□ 0.44
Ifnb1P01575 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ifnb1P01575 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Ifnb1P01575 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ifnb1P01575 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ifnb1P01575 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
Ifnb1P01575 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ifnb1P01575 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ifnb1P01575 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ifnb1P01575 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ifnb1P01575 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Ifnb1P01575 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Ifnb1P01575 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ifnb1P01575 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Ifnb1P01575 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.8■□□□□ 0.44
Ifnb1P01575 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ifnb1P01575 Gm18958-201ENSMUST00000174258 762 ntBASIC17.8■□□□□ 0.44
Ifnb1P01575 Gm3375-201ENSMUST00000203929 796 ntBASIC17.8■□□□□ 0.44
Ifnb1P01575 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.8■□□□□ 0.44
Ifnb1P01575 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ifnb1P01575 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ifnb1P01575 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ifnb1P01575 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ifnb1P01575 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.8■□□□□ 0.44
Ifnb1P01575 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ifnb1P01575 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms