Protein–RNA interactions for Protein: P01572

Ifna1, Interferon alpha-1, mousemouse

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ifna1P01572 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ifna1P01572 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ifna1P01572 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ifna1P01572 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
Ifna1P01572 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ifna1P01572 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ifna1P01572 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Ifna1P01572 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ifna1P01572 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ifna1P01572 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ifna1P01572 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ifna1P01572 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ifna1P01572 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ifna1P01572 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ifna1P01572 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Ifna1P01572 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC14.29□□□□□ -0.12
Ifna1P01572 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ifna1P01572 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ifna1P01572 Mir6349-201ENSMUST00000184059 97 ntBASIC14.29□□□□□ -0.12
Ifna1P01572 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Ifna1P01572 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Ifna1P01572 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ifna1P01572 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ifna1P01572 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Ifna1P01572 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ifna1P01572 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC14.29□□□□□ -0.12
Ifna1P01572 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ifna1P01572 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC14.29□□□□□ -0.12
Ifna1P01572 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ifna1P01572 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ifna1P01572 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ifna1P01572 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ifna1P01572 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Ifna1P01572 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ifna1P01572 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ifna1P01572 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ifna1P01572 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ifna1P01572 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ifna1P01572 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ifna1P01572 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ifna1P01572 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ifna1P01572 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ifna1P01572 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ifna1P01572 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ifna1P01572 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ifna1P01572 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ifna1P01572 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ifna1P01572 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ifna1P01572 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ifna1P01572 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ifna1P01572 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Ifna1P01572 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ifna1P01572 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC14.28□□□□□ -0.12
Ifna1P01572 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ifna1P01572 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ifna1P01572 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ifna1P01572 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ifna1P01572 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ifna1P01572 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ifna1P01572 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC14.28□□□□□ -0.12
Ifna1P01572 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ifna1P01572 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC14.27□□□□□ -0.12
Ifna1P01572 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ifna1P01572 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ifna1P01572 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ifna1P01572 Gm10654-201ENSMUST00000098653 1633 ntBASIC14.27□□□□□ -0.12
Ifna1P01572 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ifna1P01572 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ifna1P01572 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ifna1P01572 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ifna1P01572 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ifna1P01572 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC14.27□□□□□ -0.13
Ifna1P01572 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ifna1P01572 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC14.27□□□□□ -0.13
Ifna1P01572 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ifna1P01572 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ifna1P01572 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Ifna1P01572 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ifna1P01572 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ifna1P01572 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Ifna1P01572 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ifna1P01572 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ifna1P01572 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC14.27□□□□□ -0.13
Ifna1P01572 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ifna1P01572 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Ifna1P01572 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ifna1P01572 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ifna1P01572 Gm36858-201ENSMUST00000194501 2391 ntBASIC14.26□□□□□ -0.13
Ifna1P01572 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Ifna1P01572 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ifna1P01572 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ifna1P01572 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ifna1P01572 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Ifna1P01572 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC14.26□□□□□ -0.13
Ifna1P01572 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Ifna1P01572 Rab3c-203ENSMUST00000224180 967 ntBASIC14.26□□□□□ -0.13
Ifna1P01572 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ifna1P01572 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ifna1P01572 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ifna1P01572 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms