Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CopeO89079 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.48■□□□□ 0.39
CopeO89079 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CopeO89079 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CopeO89079 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC17.48■□□□□ 0.39
CopeO89079 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CopeO89079 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CopeO89079 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.48■□□□□ 0.39
CopeO89079 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CopeO89079 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CopeO89079 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CopeO89079 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CopeO89079 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CopeO89079 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CopeO89079 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CopeO89079 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
CopeO89079 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CopeO89079 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
CopeO89079 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CopeO89079 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
CopeO89079 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CopeO89079 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CopeO89079 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17.47■□□□□ 0.39
CopeO89079 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CopeO89079 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CopeO89079 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CopeO89079 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CopeO89079 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.47■□□□□ 0.39
CopeO89079 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CopeO89079 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CopeO89079 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
CopeO89079 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CopeO89079 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CopeO89079 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CopeO89079 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CopeO89079 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
CopeO89079 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CopeO89079 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CopeO89079 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CopeO89079 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC17.46■□□□□ 0.39
CopeO89079 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CopeO89079 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CopeO89079 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.46■□□□□ 0.39
CopeO89079 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CopeO89079 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
CopeO89079 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CopeO89079 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CopeO89079 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.46■□□□□ 0.39
CopeO89079 Gm27405-201ENSMUST00000184201 112 ntBASIC17.46■□□□□ 0.39
CopeO89079 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.46■□□□□ 0.39
CopeO89079 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.46■□□□□ 0.39
CopeO89079 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CopeO89079 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CopeO89079 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CopeO89079 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CopeO89079 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
CopeO89079 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CopeO89079 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CopeO89079 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CopeO89079 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
CopeO89079 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CopeO89079 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
CopeO89079 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CopeO89079 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CopeO89079 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CopeO89079 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CopeO89079 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
CopeO89079 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CopeO89079 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CopeO89079 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
CopeO89079 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CopeO89079 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.45■□□□□ 0.38
CopeO89079 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CopeO89079 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.45■□□□□ 0.38
CopeO89079 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CopeO89079 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
CopeO89079 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CopeO89079 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CopeO89079 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CopeO89079 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CopeO89079 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CopeO89079 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.45■□□□□ 0.38
CopeO89079 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC17.45■□□□□ 0.38
CopeO89079 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CopeO89079 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CopeO89079 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CopeO89079 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CopeO89079 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CopeO89079 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CopeO89079 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CopeO89079 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CopeO89079 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CopeO89079 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
CopeO89079 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CopeO89079 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CopeO89079 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CopeO89079 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CopeO89079 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CopeO89079 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CopeO89079 Gm12933-201ENSMUST00000120203 872 ntBASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms