Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC11.99□□□□□ -0.49
Sh2d1aO88890 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sh2d1aO88890 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Sh2d1aO88890 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sh2d1aO88890 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sh2d1aO88890 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sh2d1aO88890 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sh2d1aO88890 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sh2d1aO88890 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sh2d1aO88890 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sh2d1aO88890 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sh2d1aO88890 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sh2d1aO88890 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sh2d1aO88890 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sh2d1aO88890 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sh2d1aO88890 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Sh2d1aO88890 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sh2d1aO88890 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sh2d1aO88890 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sh2d1aO88890 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sh2d1aO88890 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sh2d1aO88890 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sh2d1aO88890 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sh2d1aO88890 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sh2d1aO88890 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sh2d1aO88890 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Sh2d1aO88890 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sh2d1aO88890 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sh2d1aO88890 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sh2d1aO88890 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC11.98□□□□□ -0.49
Sh2d1aO88890 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sh2d1aO88890 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sh2d1aO88890 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sh2d1aO88890 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sh2d1aO88890 Gm12669-201ENSMUST00000122162 1009 ntBASIC11.98□□□□□ -0.49
Sh2d1aO88890 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sh2d1aO88890 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC11.98□□□□□ -0.49
Sh2d1aO88890 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sh2d1aO88890 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sh2d1aO88890 Gm43183-201ENSMUST00000200632 547 ntBASIC11.98□□□□□ -0.49
Sh2d1aO88890 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC11.98□□□□□ -0.49
Sh2d1aO88890 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sh2d1aO88890 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Sh2d1aO88890 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sh2d1aO88890 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sh2d1aO88890 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sh2d1aO88890 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sh2d1aO88890 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sh2d1aO88890 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sh2d1aO88890 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Sh2d1aO88890 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Sh2d1aO88890 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sh2d1aO88890 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sh2d1aO88890 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sh2d1aO88890 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sh2d1aO88890 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC11.98□□□□□ -0.49
Sh2d1aO88890 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sh2d1aO88890 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sh2d1aO88890 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sh2d1aO88890 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Sh2d1aO88890 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sh2d1aO88890 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Sh2d1aO88890 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sh2d1aO88890 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sh2d1aO88890 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sh2d1aO88890 Gm10517-202ENSMUST00000192970 758 ntBASIC11.97□□□□□ -0.49
Sh2d1aO88890 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Sh2d1aO88890 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sh2d1aO88890 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sh2d1aO88890 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Sh2d1aO88890 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sh2d1aO88890 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Sh2d1aO88890 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Sh2d1aO88890 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC11.97□□□□□ -0.49
Sh2d1aO88890 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC11.97□□□□□ -0.49
Sh2d1aO88890 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sh2d1aO88890 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
Sh2d1aO88890 Gm19721-201ENSMUST00000195284 1764 ntBASIC11.97□□□□□ -0.49
Sh2d1aO88890 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sh2d1aO88890 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sh2d1aO88890 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sh2d1aO88890 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sh2d1aO88890 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sh2d1aO88890 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sh2d1aO88890 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sh2d1aO88890 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sh2d1aO88890 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sh2d1aO88890 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Sh2d1aO88890 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Sh2d1aO88890 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sh2d1aO88890 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sh2d1aO88890 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC11.96□□□□□ -0.49
Sh2d1aO88890 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC11.96□□□□□ -0.49
Sh2d1aO88890 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Sh2d1aO88890 Gm5643-201ENSMUST00000117081 966 ntBASIC11.96□□□□□ -0.49
Sh2d1aO88890 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC11.96□□□□□ -0.49
Sh2d1aO88890 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC11.96□□□□□ -0.49
Sh2d1aO88890 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sh2d1aO88890 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sh2d1aO88890 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms