Protein–RNA interactions for Protein: O88834

Shd, SH2 domain-containing adapter protein D, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShdO88834 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
ShdO88834 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ShdO88834 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ShdO88834 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ShdO88834 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
ShdO88834 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ShdO88834 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ShdO88834 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ShdO88834 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
ShdO88834 Gm18958-201ENSMUST00000174258 762 ntBASIC17.28■□□□□ 0.36
ShdO88834 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ShdO88834 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.28■□□□□ 0.36
ShdO88834 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
ShdO88834 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
ShdO88834 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ShdO88834 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ShdO88834 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
ShdO88834 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ShdO88834 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ShdO88834 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ShdO88834 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
ShdO88834 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ShdO88834 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ShdO88834 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ShdO88834 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.27■□□□□ 0.36
ShdO88834 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
ShdO88834 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ShdO88834 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.27■□□□□ 0.36
ShdO88834 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.27■□□□□ 0.36
ShdO88834 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ShdO88834 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
ShdO88834 Gm27463-201ENSMUST00000183569 57 ntBASIC17.27■□□□□ 0.36
ShdO88834 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ShdO88834 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ShdO88834 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
ShdO88834 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ShdO88834 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
ShdO88834 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ShdO88834 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
ShdO88834 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
ShdO88834 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ShdO88834 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ShdO88834 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ShdO88834 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ShdO88834 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ShdO88834 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
ShdO88834 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ShdO88834 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ShdO88834 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ShdO88834 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ShdO88834 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
ShdO88834 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ShdO88834 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ShdO88834 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ShdO88834 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ShdO88834 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
ShdO88834 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
ShdO88834 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ShdO88834 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ShdO88834 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.25■□□□□ 0.35
ShdO88834 Gm11539-201ENSMUST00000119837 557 ntBASIC17.25■□□□□ 0.35
ShdO88834 Gm13436-201ENSMUST00000120418 567 ntBASIC17.25■□□□□ 0.35
ShdO88834 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
ShdO88834 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ShdO88834 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.25■□□□□ 0.35
ShdO88834 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.25■□□□□ 0.35
ShdO88834 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.25■□□□□ 0.35
ShdO88834 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ShdO88834 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ShdO88834 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ShdO88834 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ShdO88834 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ShdO88834 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ShdO88834 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ShdO88834 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
ShdO88834 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.24■□□□□ 0.35
ShdO88834 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ShdO88834 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
ShdO88834 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ShdO88834 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ShdO88834 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.24■□□□□ 0.35
ShdO88834 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC17.24■□□□□ 0.35
ShdO88834 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ShdO88834 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ShdO88834 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ShdO88834 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ShdO88834 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ShdO88834 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ShdO88834 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ShdO88834 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ShdO88834 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ShdO88834 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ShdO88834 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ShdO88834 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ShdO88834 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ShdO88834 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
ShdO88834 Wnt10b-204ENSMUST00000226655 1807 ntBASIC17.24■□□□□ 0.35
ShdO88834 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ShdO88834 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ShdO88834 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms