Protein–RNA interactions for Protein: O88809

Dcx, Neuronal migration protein doublecortin, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DcxO88809 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
DcxO88809 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DcxO88809 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
DcxO88809 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DcxO88809 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
DcxO88809 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DcxO88809 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
DcxO88809 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DcxO88809 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
DcxO88809 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
DcxO88809 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DcxO88809 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DcxO88809 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
DcxO88809 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
DcxO88809 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
DcxO88809 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
DcxO88809 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC18.33■□□□□ 0.53
DcxO88809 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
DcxO88809 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
DcxO88809 Cmtm5-203ENSMUST00000227441 610 ntBASIC18.33■□□□□ 0.52
DcxO88809 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
DcxO88809 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
DcxO88809 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
DcxO88809 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
DcxO88809 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
DcxO88809 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.33■□□□□ 0.52
DcxO88809 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
DcxO88809 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
DcxO88809 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.32■□□□□ 0.52
DcxO88809 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DcxO88809 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DcxO88809 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DcxO88809 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC18.32■□□□□ 0.52
DcxO88809 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC18.32■□□□□ 0.52
DcxO88809 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC18.32■□□□□ 0.52
DcxO88809 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DcxO88809 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DcxO88809 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DcxO88809 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DcxO88809 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DcxO88809 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.31■□□□□ 0.52
DcxO88809 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DcxO88809 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DcxO88809 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
DcxO88809 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DcxO88809 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DcxO88809 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
DcxO88809 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
DcxO88809 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
DcxO88809 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC18.31■□□□□ 0.52
DcxO88809 AC160338.1-201ENSMUST00000214232 705 ntBASIC18.31■□□□□ 0.52
DcxO88809 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC18.31■□□□□ 0.52
DcxO88809 Zkscan4-202ENSMUST00000225845 1506 ntBASIC18.31■□□□□ 0.52
DcxO88809 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DcxO88809 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
DcxO88809 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.31■□□□□ 0.52
DcxO88809 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DcxO88809 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
DcxO88809 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
DcxO88809 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DcxO88809 Gm18856-201ENSMUST00000178096 1374 ntBASIC18.3■□□□□ 0.52
DcxO88809 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
DcxO88809 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DcxO88809 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
DcxO88809 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DcxO88809 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DcxO88809 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
DcxO88809 Gm24513-201ENSMUST00000174964 138 ntBASIC18.3■□□□□ 0.52
DcxO88809 Mir5126-201ENSMUST00000175513 77 ntBASIC18.3■□□□□ 0.52
DcxO88809 Gm27397-201ENSMUST00000184997 107 ntBASIC18.3■□□□□ 0.52
DcxO88809 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DcxO88809 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DcxO88809 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC18.3■□□□□ 0.52
DcxO88809 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DcxO88809 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DcxO88809 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC18.3■□□□□ 0.52
DcxO88809 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DcxO88809 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
DcxO88809 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DcxO88809 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.3■□□□□ 0.52
DcxO88809 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
DcxO88809 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.29■□□□□ 0.52
DcxO88809 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
DcxO88809 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
DcxO88809 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
DcxO88809 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
DcxO88809 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC18.29■□□□□ 0.52
DcxO88809 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC18.29■□□□□ 0.52
DcxO88809 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
DcxO88809 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
DcxO88809 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
DcxO88809 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
DcxO88809 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
DcxO88809 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.29■□□□□ 0.52
DcxO88809 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
DcxO88809 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC18.28■□□□□ 0.52
DcxO88809 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.28■□□□□ 0.52
DcxO88809 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
DcxO88809 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC18.28■□□□□ 0.52
DcxO88809 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms