Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cldn1O88551 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC14.49□□□□□ -0.09
Cldn1O88551 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC14.49□□□□□ -0.09
Cldn1O88551 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cldn1O88551 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cldn1O88551 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cldn1O88551 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cldn1O88551 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cldn1O88551 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cldn1O88551 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cldn1O88551 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cldn1O88551 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cldn1O88551 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cldn1O88551 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cldn1O88551 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cldn1O88551 Gm13884-201ENSMUST00000118103 829 ntBASIC14.48□□□□□ -0.09
Cldn1O88551 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC14.48□□□□□ -0.09
Cldn1O88551 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cldn1O88551 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC14.48□□□□□ -0.09
Cldn1O88551 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cldn1O88551 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cldn1O88551 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cldn1O88551 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cldn1O88551 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cldn1O88551 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC14.48□□□□□ -0.09
Cldn1O88551 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC14.48□□□□□ -0.09
Cldn1O88551 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cldn1O88551 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cldn1O88551 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cldn1O88551 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cldn1O88551 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Cldn1O88551 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cldn1O88551 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cldn1O88551 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cldn1O88551 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cldn1O88551 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cldn1O88551 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC14.47□□□□□ -0.09
Cldn1O88551 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cldn1O88551 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cldn1O88551 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cldn1O88551 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Cldn1O88551 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Cldn1O88551 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cldn1O88551 Gm37722-201ENSMUST00000193757 208 ntBASIC14.47□□□□□ -0.09
Cldn1O88551 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cldn1O88551 Gm45328-201ENSMUST00000210942 917 ntBASIC14.47□□□□□ -0.09
Cldn1O88551 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cldn1O88551 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Cldn1O88551 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Cldn1O88551 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cldn1O88551 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Cldn1O88551 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cldn1O88551 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cldn1O88551 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cldn1O88551 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC14.47□□□□□ -0.09
Cldn1O88551 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cldn1O88551 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cldn1O88551 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Cldn1O88551 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Cldn1O88551 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Cldn1O88551 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cldn1O88551 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cldn1O88551 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cldn1O88551 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cldn1O88551 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Cldn1O88551 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC14.46□□□□□ -0.09
Cldn1O88551 Mir8098-201ENSMUST00000184011 137 ntBASIC14.46□□□□□ -0.09
Cldn1O88551 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC14.46□□□□□ -0.09
Cldn1O88551 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Cldn1O88551 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cldn1O88551 Gm9194-201ENSMUST00000220749 1447 ntBASIC14.46□□□□□ -0.09
Cldn1O88551 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cldn1O88551 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC14.46□□□□□ -0.09
Cldn1O88551 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC14.46□□□□□ -0.09
Cldn1O88551 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cldn1O88551 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cldn1O88551 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cldn1O88551 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cldn1O88551 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Cldn1O88551 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cldn1O88551 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cldn1O88551 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cldn1O88551 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cldn1O88551 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cldn1O88551 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cldn1O88551 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cldn1O88551 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cldn1O88551 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Cldn1O88551 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cldn1O88551 Gm27459-201ENSMUST00000184860 107 ntBASIC14.45□□□□□ -0.1
Cldn1O88551 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cldn1O88551 Gm37025-201ENSMUST00000195159 829 ntBASIC14.45□□□□□ -0.1
Cldn1O88551 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cldn1O88551 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cldn1O88551 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cldn1O88551 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cldn1O88551 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cldn1O88551 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cldn1O88551 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC14.45□□□□□ -0.1
Cldn1O88551 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 166.6 ms