Protein–RNA interactions for Protein: O88543

Cops3, COP9 signalosome complex subunit 3, mousemouse

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops3O88543 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cops3O88543 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cops3O88543 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cops3O88543 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cops3O88543 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Cops3O88543 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cops3O88543 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cops3O88543 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC15.16■□□□□ 0.02
Cops3O88543 Gm37166-201ENSMUST00000195473 2474 ntBASIC15.16■□□□□ 0.02
Cops3O88543 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cops3O88543 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cops3O88543 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cops3O88543 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC15.16■□□□□ 0.02
Cops3O88543 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC15.16■□□□□ 0.02
Cops3O88543 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC15.16■□□□□ 0.02
Cops3O88543 AC166341.7-201ENSMUST00000221698 126 ntBASIC15.16■□□□□ 0.02
Cops3O88543 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC15.16■□□□□ 0.02
Cops3O88543 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Cops3O88543 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Cops3O88543 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC15.16■□□□□ 0.02
Cops3O88543 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Cops3O88543 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cops3O88543 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cops3O88543 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cops3O88543 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC15.16■□□□□ 0.02
Cops3O88543 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cops3O88543 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cops3O88543 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cops3O88543 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cops3O88543 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC15.16■□□□□ 0.02
Cops3O88543 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cops3O88543 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cops3O88543 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cops3O88543 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cops3O88543 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cops3O88543 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Cops3O88543 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cops3O88543 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Cops3O88543 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC15.15■□□□□ 0.02
Cops3O88543 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cops3O88543 Gm3807-201ENSMUST00000193520 1168 ntBASIC15.15■□□□□ 0.02
Cops3O88543 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC15.15■□□□□ 0.02
Cops3O88543 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cops3O88543 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Cops3O88543 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Cops3O88543 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Cops3O88543 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cops3O88543 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cops3O88543 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Cops3O88543 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cops3O88543 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cops3O88543 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cops3O88543 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Cops3O88543 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cops3O88543 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cops3O88543 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cops3O88543 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cops3O88543 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cops3O88543 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cops3O88543 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.14■□□□□ 0.01
Cops3O88543 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC15.14■□□□□ 0.01
Cops3O88543 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cops3O88543 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cops3O88543 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Cops3O88543 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC15.14■□□□□ 0.01
Cops3O88543 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cops3O88543 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cops3O88543 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cops3O88543 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cops3O88543 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cops3O88543 Gm36858-201ENSMUST00000194501 2391 ntBASIC15.14■□□□□ 0.01
Cops3O88543 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Cops3O88543 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cops3O88543 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cops3O88543 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cops3O88543 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cops3O88543 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cops3O88543 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cops3O88543 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Cops3O88543 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cops3O88543 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cops3O88543 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Cops3O88543 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Cops3O88543 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cops3O88543 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cops3O88543 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC15.13■□□□□ 0.01
Cops3O88543 Gm42545-201ENSMUST00000202755 922 ntBASIC15.13■□□□□ 0.01
Cops3O88543 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Cops3O88543 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cops3O88543 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cops3O88543 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cops3O88543 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cops3O88543 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
Cops3O88543 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Cops3O88543 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cops3O88543 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cops3O88543 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cops3O88543 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Cops3O88543 Gm43598-201ENSMUST00000202482 2479 ntBASIC15.12■□□□□ 0.01
Cops3O88543 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms