Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cacna1hO88427 Gm11424-201ENSMUST00000121929 829 ntBASIC16.44■□□□□ 0.22
Cacna1hO88427 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Cacna1hO88427 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Cacna1hO88427 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cacna1hO88427 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cacna1hO88427 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cacna1hO88427 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cacna1hO88427 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cacna1hO88427 Gm9885-202ENSMUST00000186234 2209 ntBASIC16.43■□□□□ 0.22
Cacna1hO88427 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cacna1hO88427 Gm18421-201ENSMUST00000204122 625 ntBASIC16.43■□□□□ 0.22
Cacna1hO88427 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC16.43■□□□□ 0.22
Cacna1hO88427 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Cacna1hO88427 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Cacna1hO88427 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cacna1hO88427 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Cacna1hO88427 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cacna1hO88427 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cacna1hO88427 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.43■□□□□ 0.22
Cacna1hO88427 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cacna1hO88427 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cacna1hO88427 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cacna1hO88427 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Cacna1hO88427 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC16.43■□□□□ 0.22
Cacna1hO88427 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC16.43■□□□□ 0.22
Cacna1hO88427 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Cacna1hO88427 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cacna1hO88427 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Cacna1hO88427 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cacna1hO88427 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
Cacna1hO88427 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cacna1hO88427 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC16.42■□□□□ 0.22
Cacna1hO88427 Gm27494-201ENSMUST00000184735 189 ntBASIC16.42■□□□□ 0.22
Cacna1hO88427 Gm37584-201ENSMUST00000193595 1290 ntBASIC16.42■□□□□ 0.22
Cacna1hO88427 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.42■□□□□ 0.22
Cacna1hO88427 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cacna1hO88427 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cacna1hO88427 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cacna1hO88427 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cacna1hO88427 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cacna1hO88427 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC16.42■□□□□ 0.22
Cacna1hO88427 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
Cacna1hO88427 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC16.42■□□□□ 0.22
Cacna1hO88427 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cacna1hO88427 Gm12497-201ENSMUST00000138778 237 ntBASIC16.42■□□□□ 0.22
Cacna1hO88427 Gm7506-201ENSMUST00000207758 815 ntBASIC16.42■□□□□ 0.22
Cacna1hO88427 Gm7229-201ENSMUST00000214719 1007 ntBASIC16.42■□□□□ 0.22
Cacna1hO88427 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cacna1hO88427 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC16.42■□□□□ 0.22
Cacna1hO88427 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cacna1hO88427 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cacna1hO88427 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cacna1hO88427 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cacna1hO88427 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cacna1hO88427 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cacna1hO88427 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cacna1hO88427 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cacna1hO88427 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cacna1hO88427 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cacna1hO88427 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cacna1hO88427 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC16.41■□□□□ 0.22
Cacna1hO88427 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC16.41■□□□□ 0.22
Cacna1hO88427 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC16.41■□□□□ 0.22
Cacna1hO88427 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cacna1hO88427 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Cacna1hO88427 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Cacna1hO88427 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cacna1hO88427 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cacna1hO88427 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cacna1hO88427 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cacna1hO88427 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cacna1hO88427 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Cacna1hO88427 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cacna1hO88427 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cacna1hO88427 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC16.41■□□□□ 0.22
Cacna1hO88427 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Cacna1hO88427 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Cacna1hO88427 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC16.41■□□□□ 0.22
Cacna1hO88427 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cacna1hO88427 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cacna1hO88427 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cacna1hO88427 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Cacna1hO88427 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cacna1hO88427 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC16.4■□□□□ 0.22
Cacna1hO88427 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cacna1hO88427 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC16.4■□□□□ 0.22
Cacna1hO88427 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC16.4■□□□□ 0.22
Cacna1hO88427 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC16.4■□□□□ 0.22
Cacna1hO88427 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cacna1hO88427 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cacna1hO88427 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cacna1hO88427 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cacna1hO88427 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.4■□□□□ 0.22
Cacna1hO88427 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC16.4■□□□□ 0.22
Cacna1hO88427 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cacna1hO88427 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Cacna1hO88427 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cacna1hO88427 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cacna1hO88427 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms