Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
Ubr1O70481 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Ubr1O70481 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC21.92■■□□□ 1.1
Ubr1O70481 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC21.92■■□□□ 1.1
Ubr1O70481 Gm6443-201ENSMUST00000203599 874 ntBASIC21.92■■□□□ 1.1
Ubr1O70481 Gm6296-201ENSMUST00000222599 943 ntBASIC21.92■■□□□ 1.1
Ubr1O70481 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC21.91■■□□□ 1.1
Ubr1O70481 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
Ubr1O70481 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Ubr1O70481 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ubr1O70481 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ubr1O70481 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ubr1O70481 Mir5131-201ENSMUST00000175426 93 ntBASIC21.91■■□□□ 1.1
Ubr1O70481 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC21.91■■□□□ 1.1
Ubr1O70481 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ubr1O70481 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ubr1O70481 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC21.91■■□□□ 1.1
Ubr1O70481 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
Ubr1O70481 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC21.91■■□□□ 1.1
Ubr1O70481 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ubr1O70481 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC21.9■■□□□ 1.1
Ubr1O70481 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Ubr1O70481 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC21.9■■□□□ 1.1
Ubr1O70481 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
Ubr1O70481 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ubr1O70481 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ubr1O70481 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ubr1O70481 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ubr1O70481 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.1
Ubr1O70481 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Ubr1O70481 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Ubr1O70481 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Ubr1O70481 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Ubr1O70481 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Ubr1O70481 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Ubr1O70481 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Ubr1O70481 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Ubr1O70481 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Ubr1O70481 Gm37194-201ENSMUST00000193092 3031 ntBASIC21.89■■□□□ 1.09
Ubr1O70481 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
Ubr1O70481 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC21.89■■□□□ 1.09
Ubr1O70481 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Ubr1O70481 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
Ubr1O70481 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC21.89■■□□□ 1.09
Ubr1O70481 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
Ubr1O70481 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ubr1O70481 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ubr1O70481 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ubr1O70481 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Ubr1O70481 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ubr1O70481 Gm7507-201ENSMUST00000183053 1008 ntBASIC21.88■■□□□ 1.09
Ubr1O70481 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
Ubr1O70481 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Ubr1O70481 AC160338.1-201ENSMUST00000214232 705 ntBASIC21.88■■□□□ 1.09
Ubr1O70481 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC21.88■■□□□ 1.09
Ubr1O70481 AC107711.5-202ENSMUST00000226429 702 ntBASIC21.88■■□□□ 1.09
Ubr1O70481 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ubr1O70481 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ubr1O70481 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ubr1O70481 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Ubr1O70481 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ubr1O70481 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Ubr1O70481 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ubr1O70481 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ubr1O70481 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ubr1O70481 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ubr1O70481 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ubr1O70481 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ubr1O70481 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ubr1O70481 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ubr1O70481 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ubr1O70481 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ubr1O70481 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ubr1O70481 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
Ubr1O70481 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ubr1O70481 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ubr1O70481 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ubr1O70481 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
Ubr1O70481 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ubr1O70481 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC21.87■■□□□ 1.09
Ubr1O70481 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ubr1O70481 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Ubr1O70481 Gm7506-201ENSMUST00000207758 815 ntBASIC21.87■■□□□ 1.09
Ubr1O70481 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ubr1O70481 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Ubr1O70481 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ubr1O70481 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC21.86■■□□□ 1.09
Ubr1O70481 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ubr1O70481 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ubr1O70481 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ubr1O70481 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC21.86■■□□□ 1.09
Ubr1O70481 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Ubr1O70481 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
Ubr1O70481 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ubr1O70481 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Ubr1O70481 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Ubr1O70481 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC21.86■■□□□ 1.09
Ubr1O70481 Gm9889-202ENSMUST00000206983 1577 ntBASIC21.86■■□□□ 1.09
Ubr1O70481 Gm10060-201ENSMUST00000212002 111 ntBASIC21.86■■□□□ 1.09
Ubr1O70481 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 72.6 ms