Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pdlim1O70400 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pdlim1O70400 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
Pdlim1O70400 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pdlim1O70400 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pdlim1O70400 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pdlim1O70400 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pdlim1O70400 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Pdlim1O70400 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC16.69■□□□□ 0.26
Pdlim1O70400 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC16.69■□□□□ 0.26
Pdlim1O70400 AC121577.1-201ENSMUST00000227302 707 ntBASIC16.69■□□□□ 0.26
Pdlim1O70400 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pdlim1O70400 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.69■□□□□ 0.26
Pdlim1O70400 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pdlim1O70400 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pdlim1O70400 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pdlim1O70400 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pdlim1O70400 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pdlim1O70400 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pdlim1O70400 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pdlim1O70400 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pdlim1O70400 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pdlim1O70400 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pdlim1O70400 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.68■□□□□ 0.26
Pdlim1O70400 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pdlim1O70400 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC16.68■□□□□ 0.26
Pdlim1O70400 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Pdlim1O70400 Gm18032-201ENSMUST00000222541 538 ntBASIC16.68■□□□□ 0.26
Pdlim1O70400 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pdlim1O70400 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pdlim1O70400 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pdlim1O70400 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Pdlim1O70400 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pdlim1O70400 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Pdlim1O70400 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.68■□□□□ 0.26
Pdlim1O70400 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.67■□□□□ 0.26
Pdlim1O70400 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pdlim1O70400 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pdlim1O70400 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pdlim1O70400 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pdlim1O70400 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pdlim1O70400 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pdlim1O70400 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Pdlim1O70400 Gm13836-201ENSMUST00000121159 501 ntBASIC16.67■□□□□ 0.26
Pdlim1O70400 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.67■□□□□ 0.26
Pdlim1O70400 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pdlim1O70400 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pdlim1O70400 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Pdlim1O70400 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pdlim1O70400 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pdlim1O70400 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Pdlim1O70400 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pdlim1O70400 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pdlim1O70400 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.67■□□□□ 0.26
Pdlim1O70400 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pdlim1O70400 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pdlim1O70400 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pdlim1O70400 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pdlim1O70400 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pdlim1O70400 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
Pdlim1O70400 Gm13186-201ENSMUST00000118031 316 ntBASIC16.66■□□□□ 0.26
Pdlim1O70400 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pdlim1O70400 Gm22697-201ENSMUST00000175194 63 ntBASIC16.66■□□□□ 0.26
Pdlim1O70400 Gm27389-201ENSMUST00000183622 195 ntBASIC16.66■□□□□ 0.26
Pdlim1O70400 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pdlim1O70400 Gm18101-201ENSMUST00000215769 548 ntBASIC16.66■□□□□ 0.26
Pdlim1O70400 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pdlim1O70400 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pdlim1O70400 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pdlim1O70400 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pdlim1O70400 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pdlim1O70400 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pdlim1O70400 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Pdlim1O70400 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.66■□□□□ 0.26
Pdlim1O70400 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Pdlim1O70400 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Pdlim1O70400 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
Pdlim1O70400 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pdlim1O70400 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pdlim1O70400 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pdlim1O70400 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pdlim1O70400 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pdlim1O70400 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pdlim1O70400 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pdlim1O70400 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pdlim1O70400 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pdlim1O70400 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pdlim1O70400 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pdlim1O70400 Gm6190-201ENSMUST00000220683 1374 ntBASIC16.65■□□□□ 0.26
Pdlim1O70400 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pdlim1O70400 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pdlim1O70400 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pdlim1O70400 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pdlim1O70400 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pdlim1O70400 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pdlim1O70400 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC16.65■□□□□ 0.26
Pdlim1O70400 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pdlim1O70400 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Pdlim1O70400 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pdlim1O70400 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 386.2 ms