Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Trdmt1O55055 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trdmt1O55055 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Trdmt1O55055 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Trdmt1O55055 Tfap2a-209ENSMUST00000225180 1828 ntBASIC18.58■□□□□ 0.57
Trdmt1O55055 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trdmt1O55055 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trdmt1O55055 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC18.58■□□□□ 0.56
Trdmt1O55055 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trdmt1O55055 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC18.58■□□□□ 0.56
Trdmt1O55055 Gm18195-201ENSMUST00000207604 706 ntBASIC18.58■□□□□ 0.56
Trdmt1O55055 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC18.58■□□□□ 0.56
Trdmt1O55055 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC18.58■□□□□ 0.56
Trdmt1O55055 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trdmt1O55055 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trdmt1O55055 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.58■□□□□ 0.56
Trdmt1O55055 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Trdmt1O55055 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Trdmt1O55055 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trdmt1O55055 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Trdmt1O55055 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trdmt1O55055 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Trdmt1O55055 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trdmt1O55055 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Trdmt1O55055 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trdmt1O55055 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Trdmt1O55055 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
Trdmt1O55055 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
Trdmt1O55055 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trdmt1O55055 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trdmt1O55055 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trdmt1O55055 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trdmt1O55055 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trdmt1O55055 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trdmt1O55055 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC18.57■□□□□ 0.56
Trdmt1O55055 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC18.57■□□□□ 0.56
Trdmt1O55055 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trdmt1O55055 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trdmt1O55055 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trdmt1O55055 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC18.57■□□□□ 0.56
Trdmt1O55055 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trdmt1O55055 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trdmt1O55055 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trdmt1O55055 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trdmt1O55055 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trdmt1O55055 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trdmt1O55055 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trdmt1O55055 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Trdmt1O55055 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC18.56■□□□□ 0.56
Trdmt1O55055 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.56■□□□□ 0.56
Trdmt1O55055 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC18.56■□□□□ 0.56
Trdmt1O55055 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trdmt1O55055 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Trdmt1O55055 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trdmt1O55055 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC18.56■□□□□ 0.56
Trdmt1O55055 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Trdmt1O55055 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Trdmt1O55055 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC18.56■□□□□ 0.56
Trdmt1O55055 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Trdmt1O55055 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trdmt1O55055 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trdmt1O55055 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trdmt1O55055 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC18.56■□□□□ 0.56
Trdmt1O55055 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trdmt1O55055 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Trdmt1O55055 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trdmt1O55055 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trdmt1O55055 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trdmt1O55055 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trdmt1O55055 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trdmt1O55055 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Trdmt1O55055 Rps4l-201ENSMUST00000071745 943 ntBASIC18.55■□□□□ 0.56
Trdmt1O55055 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trdmt1O55055 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trdmt1O55055 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trdmt1O55055 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trdmt1O55055 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Trdmt1O55055 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trdmt1O55055 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trdmt1O55055 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Trdmt1O55055 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trdmt1O55055 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trdmt1O55055 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trdmt1O55055 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trdmt1O55055 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trdmt1O55055 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trdmt1O55055 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trdmt1O55055 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Trdmt1O55055 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Trdmt1O55055 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC18.54■□□□□ 0.56
Trdmt1O55055 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trdmt1O55055 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trdmt1O55055 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trdmt1O55055 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trdmt1O55055 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trdmt1O55055 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trdmt1O55055 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trdmt1O55055 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trdmt1O55055 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trdmt1O55055 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms