Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Gm17807-201ENSMUST00000186869 298 ntBASIC14.31□□□□□ -0.12
Cxcl13O55038 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cxcl13O55038 Gm18115-201ENSMUST00000221209 621 ntBASIC14.31□□□□□ -0.12
Cxcl13O55038 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cxcl13O55038 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cxcl13O55038 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cxcl13O55038 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cxcl13O55038 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cxcl13O55038 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC14.31□□□□□ -0.12
Cxcl13O55038 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC14.31□□□□□ -0.12
Cxcl13O55038 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cxcl13O55038 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Cxcl13O55038 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cxcl13O55038 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cxcl13O55038 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cxcl13O55038 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cxcl13O55038 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC14.3□□□□□ -0.12
Cxcl13O55038 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cxcl13O55038 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cxcl13O55038 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC14.3□□□□□ -0.12
Cxcl13O55038 Gm27742-201ENSMUST00000184667 60 ntBASIC14.3□□□□□ -0.12
Cxcl13O55038 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cxcl13O55038 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cxcl13O55038 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cxcl13O55038 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cxcl13O55038 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cxcl13O55038 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cxcl13O55038 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cxcl13O55038 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cxcl13O55038 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Cxcl13O55038 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cxcl13O55038 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cxcl13O55038 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cxcl13O55038 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cxcl13O55038 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC14.3□□□□□ -0.12
Cxcl13O55038 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Cxcl13O55038 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cxcl13O55038 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cxcl13O55038 Tfap2a-209ENSMUST00000225180 1828 ntBASIC14.29□□□□□ -0.12
Cxcl13O55038 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cxcl13O55038 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cxcl13O55038 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC14.29□□□□□ -0.12
Cxcl13O55038 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cxcl13O55038 Gm43182-201ENSMUST00000199476 2528 ntBASIC14.29□□□□□ -0.12
Cxcl13O55038 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cxcl13O55038 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cxcl13O55038 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC14.29□□□□□ -0.12
Cxcl13O55038 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cxcl13O55038 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cxcl13O55038 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC14.29□□□□□ -0.12
Cxcl13O55038 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cxcl13O55038 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Cxcl13O55038 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cxcl13O55038 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cxcl13O55038 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cxcl13O55038 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC14.29□□□□□ -0.12
Cxcl13O55038 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cxcl13O55038 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cxcl13O55038 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cxcl13O55038 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cxcl13O55038 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cxcl13O55038 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cxcl13O55038 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cxcl13O55038 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cxcl13O55038 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cxcl13O55038 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cxcl13O55038 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cxcl13O55038 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cxcl13O55038 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cxcl13O55038 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cxcl13O55038 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cxcl13O55038 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cxcl13O55038 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cxcl13O55038 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cxcl13O55038 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cxcl13O55038 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Cxcl13O55038 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cxcl13O55038 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cxcl13O55038 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cxcl13O55038 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Cxcl13O55038 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC14.28□□□□□ -0.12
Cxcl13O55038 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cxcl13O55038 AC159205.3-201ENSMUST00000224614 874 ntBASIC14.28□□□□□ -0.12
Cxcl13O55038 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cxcl13O55038 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cxcl13O55038 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cxcl13O55038 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cxcl13O55038 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cxcl13O55038 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cxcl13O55038 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cxcl13O55038 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC14.28□□□□□ -0.12
Cxcl13O55038 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cxcl13O55038 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cxcl13O55038 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC14.27□□□□□ -0.12
Cxcl13O55038 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cxcl13O55038 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cxcl13O55038 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Cxcl13O55038 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cxcl13O55038 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Cxcl13O55038 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms