Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
ChkaO54804 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ChkaO54804 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
ChkaO54804 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ChkaO54804 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ChkaO54804 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
ChkaO54804 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ChkaO54804 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ChkaO54804 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.08■□□□□ 0.32
ChkaO54804 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
ChkaO54804 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.08■□□□□ 0.32
ChkaO54804 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
ChkaO54804 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
ChkaO54804 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
ChkaO54804 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ChkaO54804 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ChkaO54804 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ChkaO54804 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ChkaO54804 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
ChkaO54804 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ChkaO54804 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ChkaO54804 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ChkaO54804 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ChkaO54804 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.07■□□□□ 0.32
ChkaO54804 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
ChkaO54804 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ChkaO54804 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
ChkaO54804 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ChkaO54804 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ChkaO54804 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
ChkaO54804 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
ChkaO54804 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ChkaO54804 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ChkaO54804 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ChkaO54804 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
ChkaO54804 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ChkaO54804 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ChkaO54804 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
ChkaO54804 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.06■□□□□ 0.32
ChkaO54804 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.06■□□□□ 0.32
ChkaO54804 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ChkaO54804 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.06■□□□□ 0.32
ChkaO54804 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ChkaO54804 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ChkaO54804 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ChkaO54804 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
ChkaO54804 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ChkaO54804 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.06■□□□□ 0.32
ChkaO54804 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.06■□□□□ 0.32
ChkaO54804 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ChkaO54804 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
ChkaO54804 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ChkaO54804 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
ChkaO54804 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ChkaO54804 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
ChkaO54804 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ChkaO54804 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ChkaO54804 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
ChkaO54804 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
ChkaO54804 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
ChkaO54804 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ChkaO54804 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ChkaO54804 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ChkaO54804 Gm13168-201ENSMUST00000121771 632 ntBASIC17.05■□□□□ 0.32
ChkaO54804 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.05■□□□□ 0.32
ChkaO54804 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.05■□□□□ 0.32
ChkaO54804 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ChkaO54804 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ChkaO54804 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ChkaO54804 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
ChkaO54804 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ChkaO54804 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC17.05■□□□□ 0.32
ChkaO54804 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
ChkaO54804 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ChkaO54804 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ChkaO54804 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ChkaO54804 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ChkaO54804 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ChkaO54804 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ChkaO54804 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ChkaO54804 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
ChkaO54804 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
ChkaO54804 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ChkaO54804 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ChkaO54804 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ChkaO54804 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
ChkaO54804 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ChkaO54804 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ChkaO54804 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ChkaO54804 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ChkaO54804 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ChkaO54804 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ChkaO54804 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ChkaO54804 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
ChkaO54804 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.03■□□□□ 0.32
ChkaO54804 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ChkaO54804 Gm27000-201ENSMUST00000182943 842 ntBASIC17.03■□□□□ 0.32
ChkaO54804 Gm9731-201ENSMUST00000209480 747 ntBASIC17.03■□□□□ 0.32
ChkaO54804 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ChkaO54804 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms