Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Matn3O35701 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Matn3O35701 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Matn3O35701 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Matn3O35701 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Matn3O35701 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Matn3O35701 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Matn3O35701 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Matn3O35701 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Matn3O35701 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Matn3O35701 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Matn3O35701 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Matn3O35701 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC15.4■□□□□ 0.06
Matn3O35701 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
Matn3O35701 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Matn3O35701 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Matn3O35701 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Matn3O35701 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Matn3O35701 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Matn3O35701 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Matn3O35701 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Matn3O35701 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Matn3O35701 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Matn3O35701 AC108858.1-201ENSMUST00000228461 1498 ntBASIC15.4■□□□□ 0.06
Matn3O35701 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC15.39■□□□□ 0.05
Matn3O35701 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Matn3O35701 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC15.39■□□□□ 0.05
Matn3O35701 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Matn3O35701 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Matn3O35701 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Matn3O35701 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Matn3O35701 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Matn3O35701 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Matn3O35701 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Matn3O35701 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC15.39■□□□□ 0.05
Matn3O35701 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Matn3O35701 AC153526.5-201ENSMUST00000218661 2147 ntBASIC15.39■□□□□ 0.05
Matn3O35701 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Matn3O35701 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Matn3O35701 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Matn3O35701 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
Matn3O35701 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Matn3O35701 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Matn3O35701 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Matn3O35701 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Matn3O35701 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Matn3O35701 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC15.39■□□□□ 0.05
Matn3O35701 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Matn3O35701 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Matn3O35701 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Matn3O35701 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Matn3O35701 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC15.39■□□□□ 0.05
Matn3O35701 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Matn3O35701 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Matn3O35701 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Matn3O35701 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Matn3O35701 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC15.38■□□□□ 0.05
Matn3O35701 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Matn3O35701 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Matn3O35701 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Matn3O35701 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Matn3O35701 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Matn3O35701 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Matn3O35701 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Matn3O35701 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Matn3O35701 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Matn3O35701 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC15.38■□□□□ 0.05
Matn3O35701 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Matn3O35701 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC15.38■□□□□ 0.05
Matn3O35701 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC15.38■□□□□ 0.05
Matn3O35701 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Matn3O35701 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Matn3O35701 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Matn3O35701 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC15.38■□□□□ 0.05
Matn3O35701 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Matn3O35701 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Matn3O35701 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Matn3O35701 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Matn3O35701 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Matn3O35701 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
Matn3O35701 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Matn3O35701 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Matn3O35701 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Matn3O35701 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Matn3O35701 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Matn3O35701 Gm10418-201ENSMUST00000100943 576 ntBASIC15.37■□□□□ 0.05
Matn3O35701 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC15.37■□□□□ 0.05
Matn3O35701 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC15.37■□□□□ 0.05
Matn3O35701 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC15.37■□□□□ 0.05
Matn3O35701 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Matn3O35701 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Matn3O35701 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Matn3O35701 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Matn3O35701 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Matn3O35701 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Matn3O35701 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Matn3O35701 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC15.37■□□□□ 0.05
Matn3O35701 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Matn3O35701 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Matn3O35701 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms