Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC19.04■□□□□ 0.64
Stx1aO35526 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Stx1aO35526 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Stx1aO35526 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Stx1aO35526 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Stx1aO35526 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Stx1aO35526 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Stx1aO35526 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Stx1aO35526 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Stx1aO35526 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Stx1aO35526 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Stx1aO35526 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC19.03■□□□□ 0.64
Stx1aO35526 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Stx1aO35526 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC19.03■□□□□ 0.64
Stx1aO35526 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
Stx1aO35526 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Stx1aO35526 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Stx1aO35526 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Stx1aO35526 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Stx1aO35526 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
Stx1aO35526 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Stx1aO35526 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Stx1aO35526 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Stx1aO35526 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Stx1aO35526 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Stx1aO35526 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Stx1aO35526 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Stx1aO35526 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Stx1aO35526 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC19.03■□□□□ 0.64
Stx1aO35526 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Stx1aO35526 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Stx1aO35526 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Stx1aO35526 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Stx1aO35526 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC19.03■□□□□ 0.64
Stx1aO35526 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Stx1aO35526 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Stx1aO35526 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Stx1aO35526 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Stx1aO35526 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Stx1aO35526 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Stx1aO35526 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Stx1aO35526 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.02■□□□□ 0.64
Stx1aO35526 AC107711.5-202ENSMUST00000226429 702 ntBASIC19.02■□□□□ 0.64
Stx1aO35526 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Stx1aO35526 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Stx1aO35526 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Stx1aO35526 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Stx1aO35526 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC19.02■□□□□ 0.64
Stx1aO35526 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Stx1aO35526 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Stx1aO35526 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Stx1aO35526 AL590614.2-201ENSMUST00000225374 1937 ntBASIC19.02■□□□□ 0.63
Stx1aO35526 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Stx1aO35526 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Stx1aO35526 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
Stx1aO35526 Gm21596-201ENSMUST00000178049 1316 ntBASIC19.01■□□□□ 0.63
Stx1aO35526 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
Stx1aO35526 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Stx1aO35526 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Stx1aO35526 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Stx1aO35526 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Stx1aO35526 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Stx1aO35526 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Stx1aO35526 Gm4974-201ENSMUST00000209974 875 ntBASIC19.01■□□□□ 0.63
Stx1aO35526 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Stx1aO35526 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Stx1aO35526 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Stx1aO35526 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Stx1aO35526 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Stx1aO35526 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Stx1aO35526 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Stx1aO35526 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19■□□□□ 0.63
Stx1aO35526 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Stx1aO35526 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC19■□□□□ 0.63
Stx1aO35526 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC19■□□□□ 0.63
Stx1aO35526 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Stx1aO35526 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC19■□□□□ 0.63
Stx1aO35526 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Stx1aO35526 Gm11249-201ENSMUST00000117071 859 ntBASIC19■□□□□ 0.63
Stx1aO35526 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC19■□□□□ 0.63
Stx1aO35526 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC19■□□□□ 0.63
Stx1aO35526 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Stx1aO35526 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC19■□□□□ 0.63
Stx1aO35526 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC19■□□□□ 0.63
Stx1aO35526 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC19■□□□□ 0.63
Stx1aO35526 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Stx1aO35526 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC19■□□□□ 0.63
Stx1aO35526 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Stx1aO35526 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Stx1aO35526 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Stx1aO35526 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC19■□□□□ 0.63
Stx1aO35526 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Stx1aO35526 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Stx1aO35526 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Stx1aO35526 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Stx1aO35526 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Stx1aO35526 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Stx1aO35526 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.99■□□□□ 0.63
Stx1aO35526 Gm18025-201ENSMUST00000221733 862 ntBASIC18.99■□□□□ 0.63
Stx1aO35526 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms