Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Col15a1O35206 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
Col15a1O35206 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Col15a1O35206 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Col15a1O35206 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Col15a1O35206 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Col15a1O35206 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC21.67■■□□□ 1.06
Col15a1O35206 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Col15a1O35206 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Col15a1O35206 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
Col15a1O35206 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Col15a1O35206 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Col15a1O35206 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Col15a1O35206 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC21.66■■□□□ 1.06
Col15a1O35206 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Col15a1O35206 Gm12350-201ENSMUST00000121208 462 ntBASIC21.66■■□□□ 1.06
Col15a1O35206 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Col15a1O35206 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Col15a1O35206 AC132104.2-201ENSMUST00000215011 266 ntBASIC21.66■■□□□ 1.06
Col15a1O35206 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Col15a1O35206 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC21.66■■□□□ 1.06
Col15a1O35206 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Col15a1O35206 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Col15a1O35206 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Col15a1O35206 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
Col15a1O35206 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Col15a1O35206 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Col15a1O35206 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
Col15a1O35206 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Col15a1O35206 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Col15a1O35206 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Col15a1O35206 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Col15a1O35206 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Col15a1O35206 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
Col15a1O35206 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Col15a1O35206 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC21.65■■□□□ 1.06
Col15a1O35206 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC21.65■■□□□ 1.06
Col15a1O35206 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Col15a1O35206 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC21.65■■□□□ 1.06
Col15a1O35206 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Col15a1O35206 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Col15a1O35206 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Col15a1O35206 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC21.65■■□□□ 1.06
Col15a1O35206 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Col15a1O35206 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Col15a1O35206 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Col15a1O35206 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Col15a1O35206 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Col15a1O35206 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Col15a1O35206 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Col15a1O35206 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Col15a1O35206 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Col15a1O35206 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
Col15a1O35206 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Col15a1O35206 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Col15a1O35206 Gm15442-201ENSMUST00000117905 1527 ntBASIC21.64■■□□□ 1.05
Col15a1O35206 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC21.64■■□□□ 1.05
Col15a1O35206 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Col15a1O35206 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Col15a1O35206 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Col15a1O35206 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Col15a1O35206 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Col15a1O35206 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Col15a1O35206 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Col15a1O35206 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC21.63■■□□□ 1.05
Col15a1O35206 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Col15a1O35206 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Col15a1O35206 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Col15a1O35206 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Col15a1O35206 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Col15a1O35206 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Col15a1O35206 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Col15a1O35206 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC21.62■■□□□ 1.05
Col15a1O35206 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Col15a1O35206 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC21.62■■□□□ 1.05
Col15a1O35206 Gm10060-201ENSMUST00000212002 111 ntBASIC21.62■■□□□ 1.05
Col15a1O35206 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Col15a1O35206 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Col15a1O35206 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Col15a1O35206 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Col15a1O35206 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC21.62■■□□□ 1.05
Col15a1O35206 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Col15a1O35206 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Col15a1O35206 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Col15a1O35206 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Col15a1O35206 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Col15a1O35206 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC21.61■■□□□ 1.05
Col15a1O35206 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC21.61■■□□□ 1.05
Col15a1O35206 Gm37935-201ENSMUST00000192012 982 ntBASIC21.61■■□□□ 1.05
Col15a1O35206 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Col15a1O35206 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Col15a1O35206 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Col15a1O35206 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Col15a1O35206 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Col15a1O35206 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Col15a1O35206 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Col15a1O35206 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Col15a1O35206 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Col15a1O35206 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Col15a1O35206 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms