Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC20.16■□□□□ 0.82
Hdac1O09106 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hdac1O09106 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hdac1O09106 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC20.16■□□□□ 0.82
Hdac1O09106 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Hdac1O09106 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hdac1O09106 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hdac1O09106 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hdac1O09106 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hdac1O09106 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hdac1O09106 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hdac1O09106 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hdac1O09106 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hdac1O09106 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hdac1O09106 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hdac1O09106 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC20.15■□□□□ 0.82
Hdac1O09106 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hdac1O09106 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC20.15■□□□□ 0.82
Hdac1O09106 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Hdac1O09106 Gm27000-201ENSMUST00000182943 842 ntBASIC20.15■□□□□ 0.82
Hdac1O09106 Gm43183-201ENSMUST00000200632 547 ntBASIC20.15■□□□□ 0.82
Hdac1O09106 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Hdac1O09106 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hdac1O09106 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Hdac1O09106 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hdac1O09106 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Hdac1O09106 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Hdac1O09106 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hdac1O09106 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Hdac1O09106 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Hdac1O09106 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Hdac1O09106 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Hdac1O09106 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Hdac1O09106 Gm9694-201ENSMUST00000193347 1189 ntBASIC20.14■□□□□ 0.81
Hdac1O09106 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC20.14■□□□□ 0.81
Hdac1O09106 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Hdac1O09106 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Hdac1O09106 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Hdac1O09106 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Hdac1O09106 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Hdac1O09106 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hdac1O09106 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hdac1O09106 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hdac1O09106 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Hdac1O09106 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Hdac1O09106 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC20.13■□□□□ 0.81
Hdac1O09106 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC20.13■□□□□ 0.81
Hdac1O09106 Gm20049-201ENSMUST00000219950 730 ntBASIC20.13■□□□□ 0.81
Hdac1O09106 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hdac1O09106 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hdac1O09106 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hdac1O09106 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hdac1O09106 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hdac1O09106 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hdac1O09106 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hdac1O09106 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Hdac1O09106 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hdac1O09106 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hdac1O09106 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Hdac1O09106 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
Hdac1O09106 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Hdac1O09106 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hdac1O09106 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hdac1O09106 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hdac1O09106 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hdac1O09106 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC20.12■□□□□ 0.81
Hdac1O09106 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC20.12■□□□□ 0.81
Hdac1O09106 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Hdac1O09106 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hdac1O09106 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hdac1O09106 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hdac1O09106 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.11■□□□□ 0.81
Hdac1O09106 H2-K2-201ENSMUST00000174250 1049 ntBASIC20.11■□□□□ 0.81
Hdac1O09106 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Hdac1O09106 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hdac1O09106 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hdac1O09106 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hdac1O09106 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Hdac1O09106 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
Hdac1O09106 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Hdac1O09106 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hdac1O09106 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hdac1O09106 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hdac1O09106 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hdac1O09106 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC20.11■□□□□ 0.81
Hdac1O09106 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Hdac1O09106 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Hdac1O09106 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hdac1O09106 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hdac1O09106 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hdac1O09106 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Hdac1O09106 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC20.1■□□□□ 0.81
Hdac1O09106 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hdac1O09106 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hdac1O09106 Gm10602-201ENSMUST00000098239 609 ntBASIC20.1■□□□□ 0.81
Hdac1O09106 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hdac1O09106 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hdac1O09106 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Hdac1O09106 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hdac1O09106 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms