Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Trove2O08848 Flg-201ENSMUST00000050758 1488 ntBASIC17.38■□□□□ 0.37
Trove2O08848 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trove2O08848 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Trove2O08848 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trove2O08848 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trove2O08848 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trove2O08848 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trove2O08848 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trove2O08848 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trove2O08848 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Trove2O08848 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Trove2O08848 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trove2O08848 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.38■□□□□ 0.37
Trove2O08848 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17.38■□□□□ 0.37
Trove2O08848 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trove2O08848 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trove2O08848 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trove2O08848 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Trove2O08848 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trove2O08848 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.38■□□□□ 0.37
Trove2O08848 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
Trove2O08848 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trove2O08848 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trove2O08848 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trove2O08848 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Trove2O08848 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trove2O08848 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Trove2O08848 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trove2O08848 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trove2O08848 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.37■□□□□ 0.37
Trove2O08848 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trove2O08848 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Trove2O08848 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trove2O08848 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trove2O08848 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trove2O08848 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Trove2O08848 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trove2O08848 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trove2O08848 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trove2O08848 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trove2O08848 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trove2O08848 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC17.36■□□□□ 0.37
Trove2O08848 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trove2O08848 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trove2O08848 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trove2O08848 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trove2O08848 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trove2O08848 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trove2O08848 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.36■□□□□ 0.37
Trove2O08848 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.36■□□□□ 0.37
Trove2O08848 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.36■□□□□ 0.37
Trove2O08848 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.36■□□□□ 0.37
Trove2O08848 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trove2O08848 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trove2O08848 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trove2O08848 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.36■□□□□ 0.37
Trove2O08848 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Trove2O08848 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trove2O08848 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trove2O08848 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trove2O08848 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Trove2O08848 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Trove2O08848 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trove2O08848 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trove2O08848 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trove2O08848 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trove2O08848 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trove2O08848 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.35■□□□□ 0.37
Trove2O08848 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.35■□□□□ 0.37
Trove2O08848 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trove2O08848 Gm38285-201ENSMUST00000192928 922 ntBASIC17.35■□□□□ 0.37
Trove2O08848 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Trove2O08848 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trove2O08848 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trove2O08848 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Trove2O08848 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trove2O08848 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trove2O08848 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trove2O08848 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trove2O08848 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trove2O08848 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trove2O08848 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trove2O08848 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trove2O08848 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Trove2O08848 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
Trove2O08848 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
Trove2O08848 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trove2O08848 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trove2O08848 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trove2O08848 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.34■□□□□ 0.37
Trove2O08848 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trove2O08848 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.34■□□□□ 0.37
Trove2O08848 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trove2O08848 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Trove2O08848 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trove2O08848 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trove2O08848 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trove2O08848 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trove2O08848 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms