Protein–RNA interactions for Protein: O08811

Ercc2, General transcription and DNA repair factor IIH helicase subunit XPD, mousemouse

Known RBP Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc2O08811 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ercc2O08811 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ercc2O08811 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ercc2O08811 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ercc2O08811 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.31■□□□□ 0.36
Ercc2O08811 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Ercc2O08811 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.31■□□□□ 0.36
Ercc2O08811 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Ercc2O08811 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ercc2O08811 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ercc2O08811 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Ercc2O08811 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ercc2O08811 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.31■□□□□ 0.36
Ercc2O08811 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ercc2O08811 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ercc2O08811 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ercc2O08811 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ercc2O08811 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ercc2O08811 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ercc2O08811 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ercc2O08811 Gm7889-201ENSMUST00000185591 958 ntBASIC17.3■□□□□ 0.36
Ercc2O08811 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Ercc2O08811 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ercc2O08811 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ercc2O08811 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ercc2O08811 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ercc2O08811 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ercc2O08811 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.29■□□□□ 0.36
Ercc2O08811 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ercc2O08811 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ercc2O08811 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ercc2O08811 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ercc2O08811 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ercc2O08811 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ercc2O08811 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ercc2O08811 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
Ercc2O08811 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Ercc2O08811 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
Ercc2O08811 AC153881.2-201ENSMUST00000214877 204 ntBASIC17.29■□□□□ 0.36
Ercc2O08811 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ercc2O08811 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ercc2O08811 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ercc2O08811 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ercc2O08811 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ercc2O08811 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Ercc2O08811 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ercc2O08811 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Ercc2O08811 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ercc2O08811 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ercc2O08811 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ercc2O08811 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Ercc2O08811 Gm16061-201ENSMUST00000122167 857 ntBASIC17.28■□□□□ 0.36
Ercc2O08811 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.28■□□□□ 0.36
Ercc2O08811 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.28■□□□□ 0.36
Ercc2O08811 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.28■□□□□ 0.36
Ercc2O08811 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Ercc2O08811 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ercc2O08811 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ercc2O08811 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ercc2O08811 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ercc2O08811 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.28■□□□□ 0.36
Ercc2O08811 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Ercc2O08811 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.28■□□□□ 0.36
Ercc2O08811 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ercc2O08811 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Ercc2O08811 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ercc2O08811 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ercc2O08811 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ercc2O08811 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ercc2O08811 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ercc2O08811 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
Ercc2O08811 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ercc2O08811 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.27■□□□□ 0.36
Ercc2O08811 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ercc2O08811 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ercc2O08811 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.27■□□□□ 0.36
Ercc2O08811 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ercc2O08811 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ercc2O08811 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Ercc2O08811 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ercc2O08811 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Ercc2O08811 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ercc2O08811 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ercc2O08811 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ercc2O08811 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ercc2O08811 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Ercc2O08811 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ercc2O08811 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ercc2O08811 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Ercc2O08811 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ercc2O08811 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Ercc2O08811 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Ercc2O08811 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Ercc2O08811 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ercc2O08811 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ercc2O08811 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Ercc2O08811 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ercc2O08811 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ercc2O08811 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ercc2O08811 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms