Protein–RNA interactions for Protein: O08641

Sh3yl1, SH3 domain-containing YSC84-like protein 1, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3yl1O08641 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sh3yl1O08641 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Sh3yl1O08641 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sh3yl1O08641 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Sh3yl1O08641 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sh3yl1O08641 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.12■□□□□ 0.17
Sh3yl1O08641 Gm11539-201ENSMUST00000119837 557 ntBASIC16.12■□□□□ 0.17
Sh3yl1O08641 Gm13436-201ENSMUST00000120418 567 ntBASIC16.12■□□□□ 0.17
Sh3yl1O08641 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.12■□□□□ 0.17
Sh3yl1O08641 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC16.12■□□□□ 0.17
Sh3yl1O08641 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sh3yl1O08641 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Sh3yl1O08641 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sh3yl1O08641 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.12■□□□□ 0.17
Sh3yl1O08641 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sh3yl1O08641 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.11■□□□□ 0.17
Sh3yl1O08641 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
Sh3yl1O08641 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sh3yl1O08641 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sh3yl1O08641 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
Sh3yl1O08641 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sh3yl1O08641 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sh3yl1O08641 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sh3yl1O08641 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sh3yl1O08641 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sh3yl1O08641 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sh3yl1O08641 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sh3yl1O08641 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sh3yl1O08641 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Sh3yl1O08641 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sh3yl1O08641 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Sh3yl1O08641 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sh3yl1O08641 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sh3yl1O08641 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sh3yl1O08641 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Sh3yl1O08641 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Sh3yl1O08641 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Sh3yl1O08641 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sh3yl1O08641 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Sh3yl1O08641 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sh3yl1O08641 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sh3yl1O08641 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sh3yl1O08641 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sh3yl1O08641 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sh3yl1O08641 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Sh3yl1O08641 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sh3yl1O08641 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC16.1■□□□□ 0.17
Sh3yl1O08641 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Sh3yl1O08641 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Sh3yl1O08641 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Sh3yl1O08641 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Sh3yl1O08641 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Sh3yl1O08641 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Sh3yl1O08641 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Sh3yl1O08641 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC16.1■□□□□ 0.17
Sh3yl1O08641 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Sh3yl1O08641 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sh3yl1O08641 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Sh3yl1O08641 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sh3yl1O08641 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Sh3yl1O08641 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sh3yl1O08641 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sh3yl1O08641 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sh3yl1O08641 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sh3yl1O08641 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sh3yl1O08641 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sh3yl1O08641 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sh3yl1O08641 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Sh3yl1O08641 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sh3yl1O08641 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sh3yl1O08641 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
Sh3yl1O08641 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sh3yl1O08641 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sh3yl1O08641 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Sh3yl1O08641 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Sh3yl1O08641 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Sh3yl1O08641 AC158538.1-201ENSMUST00000225870 294 ntBASIC16.09■□□□□ 0.17
Sh3yl1O08641 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sh3yl1O08641 Gm9987-201ENSMUST00000069768 567 ntBASIC16.09■□□□□ 0.17
Sh3yl1O08641 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sh3yl1O08641 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sh3yl1O08641 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Sh3yl1O08641 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sh3yl1O08641 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sh3yl1O08641 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Sh3yl1O08641 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sh3yl1O08641 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sh3yl1O08641 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Sh3yl1O08641 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Sh3yl1O08641 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Sh3yl1O08641 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
Sh3yl1O08641 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.08■□□□□ 0.16
Sh3yl1O08641 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sh3yl1O08641 Gm13559-201ENSMUST00000120476 863 ntBASIC16.08■□□□□ 0.16
Sh3yl1O08641 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Sh3yl1O08641 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sh3yl1O08641 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sh3yl1O08641 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sh3yl1O08641 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Sh3yl1O08641 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms