Protein–RNA interactions for Protein: O08603

Raet1b, Retinoic acid early-inducible protein 1-beta, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1bO08603 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Raet1bO08603 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Raet1bO08603 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Raet1bO08603 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Raet1bO08603 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Raet1bO08603 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Raet1bO08603 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Raet1bO08603 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Raet1bO08603 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Raet1bO08603 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Raet1bO08603 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Raet1bO08603 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Raet1bO08603 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Raet1bO08603 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Raet1bO08603 Gm7292-201ENSMUST00000194706 2527 ntBASIC14.98□□□□□ -0.01
Raet1bO08603 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Raet1bO08603 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Raet1bO08603 Gm27000-201ENSMUST00000182943 842 ntBASIC14.98□□□□□ -0.01
Raet1bO08603 Gm5297-201ENSMUST00000198555 1171 ntBASIC14.98□□□□□ -0.01
Raet1bO08603 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC14.98□□□□□ -0.01
Raet1bO08603 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Raet1bO08603 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Raet1bO08603 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Raet1bO08603 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Raet1bO08603 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Raet1bO08603 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Raet1bO08603 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Raet1bO08603 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Raet1bO08603 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Raet1bO08603 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Raet1bO08603 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Raet1bO08603 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Raet1bO08603 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Raet1bO08603 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Raet1bO08603 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Raet1bO08603 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Raet1bO08603 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC14.97□□□□□ -0.01
Raet1bO08603 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Raet1bO08603 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Raet1bO08603 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Raet1bO08603 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Raet1bO08603 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Raet1bO08603 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC14.97□□□□□ -0.01
Raet1bO08603 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC14.97□□□□□ -0.01
Raet1bO08603 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Raet1bO08603 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Raet1bO08603 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC14.97□□□□□ -0.01
Raet1bO08603 Gm18958-201ENSMUST00000174258 762 ntBASIC14.97□□□□□ -0.01
Raet1bO08603 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Raet1bO08603 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Raet1bO08603 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Raet1bO08603 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Raet1bO08603 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Raet1bO08603 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Raet1bO08603 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Raet1bO08603 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Raet1bO08603 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Raet1bO08603 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Raet1bO08603 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Raet1bO08603 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Raet1bO08603 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC14.96□□□□□ -0.01
Raet1bO08603 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Raet1bO08603 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Raet1bO08603 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Raet1bO08603 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Raet1bO08603 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Raet1bO08603 AC135963.1-201ENSMUST00000211640 717 ntBASIC14.96□□□□□ -0.01
Raet1bO08603 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Raet1bO08603 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Raet1bO08603 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Raet1bO08603 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Raet1bO08603 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Raet1bO08603 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Raet1bO08603 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Raet1bO08603 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
Raet1bO08603 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Raet1bO08603 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
Raet1bO08603 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Raet1bO08603 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC14.95□□□□□ -0.02
Raet1bO08603 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Raet1bO08603 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Raet1bO08603 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Raet1bO08603 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC14.95□□□□□ -0.02
Raet1bO08603 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Raet1bO08603 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Raet1bO08603 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Raet1bO08603 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Raet1bO08603 Gm5417-201ENSMUST00000079706 384 ntBASIC14.95□□□□□ -0.02
Raet1bO08603 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Raet1bO08603 AL590614.2-201ENSMUST00000225374 1937 ntBASIC14.95□□□□□ -0.02
Raet1bO08603 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Raet1bO08603 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Raet1bO08603 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Raet1bO08603 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Raet1bO08603 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Raet1bO08603 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Raet1bO08603 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Raet1bO08603 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Raet1bO08603 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Raet1bO08603 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms