Protein–RNA interactions for Protein: J3QNR8

Trim34b, Tripartite motif-containing 34B, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34bJ3QNR8 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim34bJ3QNR8 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim34bJ3QNR8 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim34bJ3QNR8 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC20.69■□□□□ 0.9
Trim34bJ3QNR8 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim34bJ3QNR8 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim34bJ3QNR8 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Trim34bJ3QNR8 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Trim34bJ3QNR8 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim34bJ3QNR8 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim34bJ3QNR8 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trim34bJ3QNR8 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim34bJ3QNR8 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim34bJ3QNR8 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim34bJ3QNR8 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trim34bJ3QNR8 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC20.68■□□□□ 0.9
Trim34bJ3QNR8 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Trim34bJ3QNR8 Gm7153-201ENSMUST00000117092 455 ntBASIC20.68■□□□□ 0.9
Trim34bJ3QNR8 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trim34bJ3QNR8 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim34bJ3QNR8 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim34bJ3QNR8 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim34bJ3QNR8 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim34bJ3QNR8 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim34bJ3QNR8 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Trim34bJ3QNR8 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC20.67■□□□□ 0.9
Trim34bJ3QNR8 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim34bJ3QNR8 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim34bJ3QNR8 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Trim34bJ3QNR8 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Trim34bJ3QNR8 Umpk-ps-201ENSMUST00000211897 827 ntBASIC20.67■□□□□ 0.9
Trim34bJ3QNR8 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Trim34bJ3QNR8 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Trim34bJ3QNR8 Gm42939-201ENSMUST00000197514 2205 ntBASIC20.67■□□□□ 0.9
Trim34bJ3QNR8 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
Trim34bJ3QNR8 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim34bJ3QNR8 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
Trim34bJ3QNR8 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim34bJ3QNR8 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim34bJ3QNR8 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim34bJ3QNR8 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim34bJ3QNR8 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Trim34bJ3QNR8 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Trim34bJ3QNR8 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC20.66■□□□□ 0.9
Trim34bJ3QNR8 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC20.66■□□□□ 0.9
Trim34bJ3QNR8 Gm44450-201ENSMUST00000199528 114 ntBASIC20.66■□□□□ 0.9
Trim34bJ3QNR8 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Trim34bJ3QNR8 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim34bJ3QNR8 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim34bJ3QNR8 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim34bJ3QNR8 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim34bJ3QNR8 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim34bJ3QNR8 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim34bJ3QNR8 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim34bJ3QNR8 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim34bJ3QNR8 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Trim34bJ3QNR8 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim34bJ3QNR8 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC20.65■□□□□ 0.9
Trim34bJ3QNR8 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC20.65■□□□□ 0.9
Trim34bJ3QNR8 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim34bJ3QNR8 Zkscan4-202ENSMUST00000225845 1506 ntBASIC20.65■□□□□ 0.9
Trim34bJ3QNR8 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim34bJ3QNR8 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Trim34bJ3QNR8 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC20.65■□□□□ 0.9
Trim34bJ3QNR8 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim34bJ3QNR8 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Trim34bJ3QNR8 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim34bJ3QNR8 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim34bJ3QNR8 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim34bJ3QNR8 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim34bJ3QNR8 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim34bJ3QNR8 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
Trim34bJ3QNR8 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Trim34bJ3QNR8 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Trim34bJ3QNR8 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
Trim34bJ3QNR8 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Trim34bJ3QNR8 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim34bJ3QNR8 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim34bJ3QNR8 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Trim34bJ3QNR8 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim34bJ3QNR8 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Trim34bJ3QNR8 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Trim34bJ3QNR8 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC20.64■□□□□ 0.89
Trim34bJ3QNR8 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim34bJ3QNR8 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim34bJ3QNR8 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim34bJ3QNR8 Tfap2a-209ENSMUST00000225180 1828 ntBASIC20.64■□□□□ 0.89
Trim34bJ3QNR8 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Trim34bJ3QNR8 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim34bJ3QNR8 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim34bJ3QNR8 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim34bJ3QNR8 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim34bJ3QNR8 Gm29707-201ENSMUST00000196325 491 ntBASIC20.63■□□□□ 0.89
Trim34bJ3QNR8 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim34bJ3QNR8 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim34bJ3QNR8 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim34bJ3QNR8 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim34bJ3QNR8 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim34bJ3QNR8 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim34bJ3QNR8 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms