Protein–RNA interactions for Protein: J3QMY9

Top6bl, Type 2 DNA topoisomerase 6 subunit B-like, mousemouse

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top6blJ3QMY9 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Top6blJ3QMY9 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Top6blJ3QMY9 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Top6blJ3QMY9 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Top6blJ3QMY9 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Top6blJ3QMY9 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Top6blJ3QMY9 Gm23634-201ENSMUST00000175071 91 ntBASIC17.7■□□□□ 0.42
Top6blJ3QMY9 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC17.7■□□□□ 0.42
Top6blJ3QMY9 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Top6blJ3QMY9 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Top6blJ3QMY9 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Top6blJ3QMY9 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Top6blJ3QMY9 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Top6blJ3QMY9 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Top6blJ3QMY9 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Top6blJ3QMY9 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Top6blJ3QMY9 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC17.7■□□□□ 0.42
Top6blJ3QMY9 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Top6blJ3QMY9 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Top6blJ3QMY9 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Top6blJ3QMY9 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Top6blJ3QMY9 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Top6blJ3QMY9 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Top6blJ3QMY9 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Top6blJ3QMY9 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Top6blJ3QMY9 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Top6blJ3QMY9 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Top6blJ3QMY9 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Top6blJ3QMY9 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Top6blJ3QMY9 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.69■□□□□ 0.42
Top6blJ3QMY9 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC17.69■□□□□ 0.42
Top6blJ3QMY9 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.69■□□□□ 0.42
Top6blJ3QMY9 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Top6blJ3QMY9 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Top6blJ3QMY9 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Top6blJ3QMY9 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Top6blJ3QMY9 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Top6blJ3QMY9 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Top6blJ3QMY9 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.69■□□□□ 0.42
Top6blJ3QMY9 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Top6blJ3QMY9 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Top6blJ3QMY9 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Top6blJ3QMY9 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Top6blJ3QMY9 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Top6blJ3QMY9 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Top6blJ3QMY9 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.68■□□□□ 0.42
Top6blJ3QMY9 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Top6blJ3QMY9 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Top6blJ3QMY9 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Top6blJ3QMY9 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Top6blJ3QMY9 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Top6blJ3QMY9 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Top6blJ3QMY9 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Top6blJ3QMY9 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Top6blJ3QMY9 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Top6blJ3QMY9 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.68■□□□□ 0.42
Top6blJ3QMY9 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
Top6blJ3QMY9 Gm11355-201ENSMUST00000121120 306 ntBASIC17.68■□□□□ 0.42
Top6blJ3QMY9 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Top6blJ3QMY9 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Top6blJ3QMY9 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Top6blJ3QMY9 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Top6blJ3QMY9 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC17.68■□□□□ 0.42
Top6blJ3QMY9 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Top6blJ3QMY9 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Top6blJ3QMY9 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Top6blJ3QMY9 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Top6blJ3QMY9 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Top6blJ3QMY9 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Top6blJ3QMY9 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Top6blJ3QMY9 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Top6blJ3QMY9 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Top6blJ3QMY9 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Top6blJ3QMY9 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Top6blJ3QMY9 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Top6blJ3QMY9 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.67■□□□□ 0.42
Top6blJ3QMY9 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Top6blJ3QMY9 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.67■□□□□ 0.42
Top6blJ3QMY9 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Top6blJ3QMY9 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Top6blJ3QMY9 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
Top6blJ3QMY9 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Top6blJ3QMY9 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Top6blJ3QMY9 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Top6blJ3QMY9 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.67■□□□□ 0.42
Top6blJ3QMY9 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Top6blJ3QMY9 Gm18115-201ENSMUST00000221209 621 ntBASIC17.67■□□□□ 0.42
Top6blJ3QMY9 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Top6blJ3QMY9 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Top6blJ3QMY9 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Top6blJ3QMY9 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Top6blJ3QMY9 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.67■□□□□ 0.42
Top6blJ3QMY9 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Top6blJ3QMY9 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Top6blJ3QMY9 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Top6blJ3QMY9 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Top6blJ3QMY9 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Top6blJ3QMY9 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Top6blJ3QMY9 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
Top6blJ3QMY9 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms