Protein–RNA interactions for Protein: J3QMS8

Gm3415, Predicted gene 3415, mousemouse

Predictions only

Length 315 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3415J3QMS8 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Gm3415J3QMS8 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC18.05■□□□□ 0.48
Gm3415J3QMS8 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gm3415J3QMS8 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Gm3415J3QMS8 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Gm3415J3QMS8 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.05■□□□□ 0.48
Gm3415J3QMS8 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gm3415J3QMS8 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gm3415J3QMS8 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC18.05■□□□□ 0.48
Gm3415J3QMS8 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Gm3415J3QMS8 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Gm3415J3QMS8 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.05■□□□□ 0.48
Gm3415J3QMS8 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gm3415J3QMS8 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gm3415J3QMS8 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gm3415J3QMS8 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Gm3415J3QMS8 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Gm3415J3QMS8 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gm3415J3QMS8 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gm3415J3QMS8 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Gm3415J3QMS8 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gm3415J3QMS8 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gm3415J3QMS8 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gm3415J3QMS8 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gm3415J3QMS8 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gm3415J3QMS8 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Gm3415J3QMS8 Gm16499-203ENSMUST00000204633 2177 ntBASIC18.04■□□□□ 0.48
Gm3415J3QMS8 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm3415J3QMS8 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Gm3415J3QMS8 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm3415J3QMS8 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Gm3415J3QMS8 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Gm3415J3QMS8 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Gm3415J3QMS8 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm3415J3QMS8 Gm7889-201ENSMUST00000185591 958 ntBASIC18.04■□□□□ 0.48
Gm3415J3QMS8 Il3ra-202ENSMUST00000223589 738 ntBASIC18.04■□□□□ 0.48
Gm3415J3QMS8 AC159205.6-201ENSMUST00000224935 887 ntBASIC18.04■□□□□ 0.48
Gm3415J3QMS8 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm3415J3QMS8 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Gm3415J3QMS8 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm3415J3QMS8 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm3415J3QMS8 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
Gm3415J3QMS8 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Gm3415J3QMS8 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm3415J3QMS8 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm3415J3QMS8 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm3415J3QMS8 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gm3415J3QMS8 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gm3415J3QMS8 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
Gm3415J3QMS8 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gm3415J3QMS8 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Gm3415J3QMS8 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC18.03■□□□□ 0.48
Gm3415J3QMS8 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gm3415J3QMS8 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gm3415J3QMS8 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Gm3415J3QMS8 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gm3415J3QMS8 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Gm3415J3QMS8 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gm3415J3QMS8 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Gm3415J3QMS8 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gm3415J3QMS8 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gm3415J3QMS8 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Gm3415J3QMS8 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Gm3415J3QMS8 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Gm3415J3QMS8 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
Gm3415J3QMS8 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Gm3415J3QMS8 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Gm3415J3QMS8 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Gm3415J3QMS8 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Gm3415J3QMS8 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Gm3415J3QMS8 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC18.02■□□□□ 0.48
Gm3415J3QMS8 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Gm3415J3QMS8 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC18.02■□□□□ 0.48
Gm3415J3QMS8 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Gm3415J3QMS8 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Gm3415J3QMS8 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Gm3415J3QMS8 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Gm3415J3QMS8 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.02■□□□□ 0.48
Gm3415J3QMS8 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Gm3415J3QMS8 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Gm3415J3QMS8 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Gm3415J3QMS8 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Gm3415J3QMS8 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Gm3415J3QMS8 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm3415J3QMS8 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm3415J3QMS8 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
Gm3415J3QMS8 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm3415J3QMS8 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm3415J3QMS8 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm3415J3QMS8 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC18.01■□□□□ 0.47
Gm3415J3QMS8 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm3415J3QMS8 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm3415J3QMS8 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm3415J3QMS8 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Gm3415J3QMS8 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Gm3415J3QMS8 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC18.01■□□□□ 0.47
Gm3415J3QMS8 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC18■□□□□ 0.47
Gm3415J3QMS8 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Gm3415J3QMS8 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Gm3415J3QMS8 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms