Protein–RNA interactions for Protein: F8VQC1

Srp72, Signal recognition particle subunit SRP72, mousemouse

Predictions only

Length 671 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp72F8VQC1 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Srp72F8VQC1 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.64■□□□□ 0.25
Srp72F8VQC1 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.64■□□□□ 0.25
Srp72F8VQC1 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Srp72F8VQC1 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Srp72F8VQC1 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.64■□□□□ 0.25
Srp72F8VQC1 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Srp72F8VQC1 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Srp72F8VQC1 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.64■□□□□ 0.25
Srp72F8VQC1 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Srp72F8VQC1 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Srp72F8VQC1 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.63■□□□□ 0.25
Srp72F8VQC1 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Srp72F8VQC1 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Srp72F8VQC1 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Srp72F8VQC1 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Srp72F8VQC1 Gm12382-201ENSMUST00000122005 922 ntBASIC16.63■□□□□ 0.25
Srp72F8VQC1 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC16.63■□□□□ 0.25
Srp72F8VQC1 Gm18666-201ENSMUST00000190039 958 ntBASIC16.63■□□□□ 0.25
Srp72F8VQC1 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC16.63■□□□□ 0.25
Srp72F8VQC1 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Srp72F8VQC1 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Srp72F8VQC1 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Srp72F8VQC1 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Srp72F8VQC1 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Srp72F8VQC1 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
Srp72F8VQC1 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Srp72F8VQC1 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Srp72F8VQC1 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Srp72F8VQC1 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.62■□□□□ 0.25
Srp72F8VQC1 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Srp72F8VQC1 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Srp72F8VQC1 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Srp72F8VQC1 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.62■□□□□ 0.25
Srp72F8VQC1 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Srp72F8VQC1 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Srp72F8VQC1 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Srp72F8VQC1 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Srp72F8VQC1 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Srp72F8VQC1 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC16.62■□□□□ 0.25
Srp72F8VQC1 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC16.62■□□□□ 0.25
Srp72F8VQC1 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC16.62■□□□□ 0.25
Srp72F8VQC1 Gm4974-201ENSMUST00000209974 875 ntBASIC16.62■□□□□ 0.25
Srp72F8VQC1 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Srp72F8VQC1 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Srp72F8VQC1 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Srp72F8VQC1 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Srp72F8VQC1 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
Srp72F8VQC1 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Srp72F8VQC1 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
Srp72F8VQC1 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.62■□□□□ 0.25
Srp72F8VQC1 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Srp72F8VQC1 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Srp72F8VQC1 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.62■□□□□ 0.25
Srp72F8VQC1 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Srp72F8VQC1 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
Srp72F8VQC1 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
Srp72F8VQC1 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.61■□□□□ 0.25
Srp72F8VQC1 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Srp72F8VQC1 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Srp72F8VQC1 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Srp72F8VQC1 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Srp72F8VQC1 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Srp72F8VQC1 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Srp72F8VQC1 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC16.61■□□□□ 0.25
Srp72F8VQC1 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Srp72F8VQC1 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Srp72F8VQC1 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC16.61■□□□□ 0.25
Srp72F8VQC1 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Srp72F8VQC1 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Srp72F8VQC1 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Srp72F8VQC1 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Srp72F8VQC1 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Srp72F8VQC1 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Srp72F8VQC1 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Srp72F8VQC1 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Srp72F8VQC1 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Srp72F8VQC1 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Srp72F8VQC1 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.6■□□□□ 0.25
Srp72F8VQC1 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Srp72F8VQC1 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Srp72F8VQC1 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Srp72F8VQC1 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC16.6■□□□□ 0.25
Srp72F8VQC1 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.6■□□□□ 0.25
Srp72F8VQC1 Gm37292-201ENSMUST00000192062 758 ntBASIC16.6■□□□□ 0.25
Srp72F8VQC1 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
Srp72F8VQC1 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Srp72F8VQC1 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Srp72F8VQC1 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Srp72F8VQC1 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Srp72F8VQC1 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Srp72F8VQC1 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Srp72F8VQC1 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.6■□□□□ 0.25
Srp72F8VQC1 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Srp72F8VQC1 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Srp72F8VQC1 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Srp72F8VQC1 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Srp72F8VQC1 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Srp72F8VQC1 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Srp72F8VQC1 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms