Protein–RNA interactions for Protein: E9Q555

Rnf213, E3 ubiquitin-protein ligase RNF213, mousemouse

Known RBP Predictions only

Length 5,152 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf213E9Q555 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Rnf213E9Q555 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Rnf213E9Q555 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Rnf213E9Q555 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC8.17□□□□□ -1.1
Rnf213E9Q555 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Rnf213E9Q555 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Rnf213E9Q555 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Rnf213E9Q555 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
Rnf213E9Q555 Gm27646-201ENSMUST00000183989 110 ntBASIC8.17□□□□□ -1.1
Rnf213E9Q555 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC8.17□□□□□ -1.1
Rnf213E9Q555 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Rnf213E9Q555 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Rnf213E9Q555 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Rnf213E9Q555 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Rnf213E9Q555 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
Rnf213E9Q555 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Rnf213E9Q555 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Rnf213E9Q555 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Rnf213E9Q555 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Rnf213E9Q555 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Rnf213E9Q555 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Rnf213E9Q555 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC8.16□□□□□ -1.1
Rnf213E9Q555 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC8.16□□□□□ -1.1
Rnf213E9Q555 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Rnf213E9Q555 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Rnf213E9Q555 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
Rnf213E9Q555 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Rnf213E9Q555 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Rnf213E9Q555 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Rnf213E9Q555 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Rnf213E9Q555 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
Rnf213E9Q555 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Rnf213E9Q555 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Rnf213E9Q555 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
Rnf213E9Q555 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Rnf213E9Q555 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Rnf213E9Q555 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Rnf213E9Q555 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Rnf213E9Q555 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Rnf213E9Q555 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Rnf213E9Q555 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Rnf213E9Q555 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Rnf213E9Q555 Idnk-204ENSMUST00000226010 1898 ntBASIC8.16□□□□□ -1.1
Rnf213E9Q555 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Rnf213E9Q555 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
Rnf213E9Q555 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Rnf213E9Q555 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Rnf213E9Q555 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC8.16□□□□□ -1.1
Rnf213E9Q555 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Rnf213E9Q555 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC8.16□□□□□ -1.1
Rnf213E9Q555 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
Rnf213E9Q555 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC8.16□□□□□ -1.1
Rnf213E9Q555 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Rnf213E9Q555 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Rnf213E9Q555 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Rnf213E9Q555 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Rnf213E9Q555 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Rnf213E9Q555 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC8.16□□□□□ -1.1
Rnf213E9Q555 Gm18889-201ENSMUST00000174284 929 ntBASIC8.16□□□□□ -1.1
Rnf213E9Q555 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC8.16□□□□□ -1.1
Rnf213E9Q555 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Rnf213E9Q555 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Rnf213E9Q555 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Rnf213E9Q555 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Rnf213E9Q555 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Rnf213E9Q555 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Rnf213E9Q555 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Rnf213E9Q555 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Rnf213E9Q555 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Rnf213E9Q555 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Rnf213E9Q555 Gm15442-201ENSMUST00000117905 1527 ntBASIC8.15□□□□□ -1.1
Rnf213E9Q555 Gm3928-201ENSMUST00000121141 1307 ntBASIC8.15□□□□□ -1.1
Rnf213E9Q555 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC8.15□□□□□ -1.1
Rnf213E9Q555 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Rnf213E9Q555 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC8.15□□□□□ -1.1
Rnf213E9Q555 Gm4899-201ENSMUST00000178708 719 ntBASIC8.15□□□□□ -1.1
Rnf213E9Q555 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC8.15□□□□□ -1.1
Rnf213E9Q555 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Rnf213E9Q555 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Rnf213E9Q555 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Rnf213E9Q555 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
Rnf213E9Q555 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Rnf213E9Q555 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC8.15□□□□□ -1.11
Rnf213E9Q555 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.11
Rnf213E9Q555 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
Rnf213E9Q555 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Rnf213E9Q555 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC8.15□□□□□ -1.11
Rnf213E9Q555 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
Rnf213E9Q555 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
Rnf213E9Q555 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Rnf213E9Q555 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.11
Rnf213E9Q555 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC8.15□□□□□ -1.11
Rnf213E9Q555 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Rnf213E9Q555 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Rnf213E9Q555 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
Rnf213E9Q555 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
Rnf213E9Q555 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC8.15□□□□□ -1.11
Rnf213E9Q555 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
Rnf213E9Q555 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
Rnf213E9Q555 Gm44430-201ENSMUST00000203376 995 ntBASIC8.15□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms