Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm7506-201ENSMUST00000207758 815 ntBASIC16.91■□□□□ 0.3
Col6a3E9PWQ3 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Col6a3E9PWQ3 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col6a3E9PWQ3 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Col6a3E9PWQ3 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col6a3E9PWQ3 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC16.9■□□□□ 0.3
Col6a3E9PWQ3 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC16.9■□□□□ 0.3
Col6a3E9PWQ3 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col6a3E9PWQ3 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC16.9■□□□□ 0.3
Col6a3E9PWQ3 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col6a3E9PWQ3 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col6a3E9PWQ3 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC16.9■□□□□ 0.3
Col6a3E9PWQ3 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col6a3E9PWQ3 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Col6a3E9PWQ3 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col6a3E9PWQ3 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col6a3E9PWQ3 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.9■□□□□ 0.3
Col6a3E9PWQ3 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col6a3E9PWQ3 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col6a3E9PWQ3 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC16.9■□□□□ 0.3
Col6a3E9PWQ3 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col6a3E9PWQ3 AC154572.2-201ENSMUST00000225105 997 ntBASIC16.9■□□□□ 0.3
Col6a3E9PWQ3 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col6a3E9PWQ3 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
Col6a3E9PWQ3 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Col6a3E9PWQ3 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.3
Col6a3E9PWQ3 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Col6a3E9PWQ3 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Col6a3E9PWQ3 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC16.89■□□□□ 0.29
Col6a3E9PWQ3 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC16.89■□□□□ 0.29
Col6a3E9PWQ3 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Col6a3E9PWQ3 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Col6a3E9PWQ3 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col6a3E9PWQ3 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Col6a3E9PWQ3 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Col6a3E9PWQ3 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col6a3E9PWQ3 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col6a3E9PWQ3 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col6a3E9PWQ3 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col6a3E9PWQ3 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Col6a3E9PWQ3 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Col6a3E9PWQ3 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Col6a3E9PWQ3 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
Col6a3E9PWQ3 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC16.88■□□□□ 0.29
Col6a3E9PWQ3 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Col6a3E9PWQ3 Gm3928-201ENSMUST00000121141 1307 ntBASIC16.88■□□□□ 0.29
Col6a3E9PWQ3 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Col6a3E9PWQ3 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Col6a3E9PWQ3 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Col6a3E9PWQ3 Fst-202ENSMUST00000223640 2612 ntBASIC16.88■□□□□ 0.29
Col6a3E9PWQ3 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col6a3E9PWQ3 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC16.88■□□□□ 0.29
Col6a3E9PWQ3 AC159295.1-201ENSMUST00000225326 940 ntBASIC16.88■□□□□ 0.29
Col6a3E9PWQ3 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col6a3E9PWQ3 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col6a3E9PWQ3 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col6a3E9PWQ3 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Col6a3E9PWQ3 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Col6a3E9PWQ3 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col6a3E9PWQ3 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col6a3E9PWQ3 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Col6a3E9PWQ3 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col6a3E9PWQ3 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
Col6a3E9PWQ3 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC16.88■□□□□ 0.29
Col6a3E9PWQ3 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Col6a3E9PWQ3 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Col6a3E9PWQ3 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Col6a3E9PWQ3 Mir7085-201ENSMUST00000184353 66 ntBASIC16.88■□□□□ 0.29
Col6a3E9PWQ3 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Col6a3E9PWQ3 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Col6a3E9PWQ3 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Col6a3E9PWQ3 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col6a3E9PWQ3 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Col6a3E9PWQ3 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col6a3E9PWQ3 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col6a3E9PWQ3 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Col6a3E9PWQ3 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col6a3E9PWQ3 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Col6a3E9PWQ3 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col6a3E9PWQ3 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC16.87■□□□□ 0.29
Col6a3E9PWQ3 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Col6a3E9PWQ3 Gm17968-201ENSMUST00000194902 784 ntBASIC16.87■□□□□ 0.29
Col6a3E9PWQ3 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Col6a3E9PWQ3 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC16.87■□□□□ 0.29
Col6a3E9PWQ3 Gm43474-201ENSMUST00000196415 774 ntBASIC16.87■□□□□ 0.29
Col6a3E9PWQ3 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Col6a3E9PWQ3 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Col6a3E9PWQ3 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Col6a3E9PWQ3 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col6a3E9PWQ3 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col6a3E9PWQ3 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col6a3E9PWQ3 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
Col6a3E9PWQ3 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col6a3E9PWQ3 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Col6a3E9PWQ3 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Col6a3E9PWQ3 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col6a3E9PWQ3 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col6a3E9PWQ3 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col6a3E9PWQ3 Golph3-202ENSMUST00000226517 2359 ntBASIC16.86■□□□□ 0.29
Col6a3E9PWQ3 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms