Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Shank1D3YZU1 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Shank1D3YZU1 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Shank1D3YZU1 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Shank1D3YZU1 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Shank1D3YZU1 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Shank1D3YZU1 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Shank1D3YZU1 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Shank1D3YZU1 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Shank1D3YZU1 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Shank1D3YZU1 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
Shank1D3YZU1 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC15.1■□□□□ 0.01
Shank1D3YZU1 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Shank1D3YZU1 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Shank1D3YZU1 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC15.09■□□□□ 0.01
Shank1D3YZU1 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Shank1D3YZU1 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Shank1D3YZU1 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Shank1D3YZU1 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Shank1D3YZU1 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Shank1D3YZU1 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Shank1D3YZU1 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Shank1D3YZU1 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Shank1D3YZU1 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Shank1D3YZU1 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Shank1D3YZU1 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Shank1D3YZU1 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Shank1D3YZU1 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Shank1D3YZU1 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC15.09■□□□□ 0.01
Shank1D3YZU1 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Shank1D3YZU1 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Shank1D3YZU1 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Shank1D3YZU1 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC15.09■□□□□ 0.01
Shank1D3YZU1 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Shank1D3YZU1 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Shank1D3YZU1 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC15.09■□□□□ 0.01
Shank1D3YZU1 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Shank1D3YZU1 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC15.09■□□□□ 0.01
Shank1D3YZU1 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Shank1D3YZU1 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Shank1D3YZU1 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Shank1D3YZU1 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Shank1D3YZU1 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC15.09■□□□□ 0.01
Shank1D3YZU1 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Shank1D3YZU1 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Shank1D3YZU1 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Shank1D3YZU1 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Shank1D3YZU1 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Shank1D3YZU1 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Shank1D3YZU1 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Shank1D3YZU1 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Shank1D3YZU1 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Shank1D3YZU1 AC153794.1-201ENSMUST00000169148 126 ntBASIC15.08■□□□□ 0.01
Shank1D3YZU1 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Shank1D3YZU1 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Shank1D3YZU1 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Shank1D3YZU1 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Shank1D3YZU1 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Shank1D3YZU1 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Shank1D3YZU1 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Shank1D3YZU1 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC15.08■□□□□ 0
Shank1D3YZU1 Phf7-203ENSMUST00000226565 1971 ntBASIC15.08■□□□□ 0
Shank1D3YZU1 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Shank1D3YZU1 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC15.08■□□□□ 0
Shank1D3YZU1 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC15.08■□□□□ 0
Shank1D3YZU1 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Shank1D3YZU1 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Shank1D3YZU1 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Shank1D3YZU1 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Shank1D3YZU1 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Shank1D3YZU1 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC15.07■□□□□ 0
Shank1D3YZU1 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Shank1D3YZU1 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Shank1D3YZU1 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Shank1D3YZU1 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Shank1D3YZU1 Gm1401-201ENSMUST00000122048 772 ntBASIC15.07■□□□□ 0
Shank1D3YZU1 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC15.07■□□□□ 0
Shank1D3YZU1 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC15.07■□□□□ 0
Shank1D3YZU1 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC15.07■□□□□ 0
Shank1D3YZU1 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
Shank1D3YZU1 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Shank1D3YZU1 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Shank1D3YZU1 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Shank1D3YZU1 Gm27867-201ENSMUST00000184778 125 ntBASIC15.07■□□□□ 0
Shank1D3YZU1 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC15.07■□□□□ 0
Shank1D3YZU1 AC159093.1-201ENSMUST00000227779 380 ntBASIC15.07■□□□□ 0
Shank1D3YZU1 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Shank1D3YZU1 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Shank1D3YZU1 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Shank1D3YZU1 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Shank1D3YZU1 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Shank1D3YZU1 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC15.06■□□□□ 0
Shank1D3YZU1 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC15.06■□□□□ 0
Shank1D3YZU1 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Shank1D3YZU1 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Shank1D3YZU1 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Shank1D3YZU1 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Shank1D3YZU1 Cmtm5-203ENSMUST00000227441 610 ntBASIC15.06■□□□□ 0
Shank1D3YZU1 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Shank1D3YZU1 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms