Protein–RNA interactions for Protein: B5KM66

Syce3, Synaptonemal complex central element protein 3, mousemouse

Predictions only

Length 88 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syce3B5KM66 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Syce3B5KM66 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Syce3B5KM66 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Syce3B5KM66 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Syce3B5KM66 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Syce3B5KM66 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Syce3B5KM66 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Syce3B5KM66 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Syce3B5KM66 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Syce3B5KM66 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC19.41■□□□□ 0.7
Syce3B5KM66 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Syce3B5KM66 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Syce3B5KM66 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Syce3B5KM66 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Syce3B5KM66 Gm29241-201ENSMUST00000189260 1096 ntBASIC19.41■□□□□ 0.7
Syce3B5KM66 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Syce3B5KM66 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Syce3B5KM66 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Syce3B5KM66 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC19.4■□□□□ 0.7
Syce3B5KM66 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Syce3B5KM66 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC19.4■□□□□ 0.7
Syce3B5KM66 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Syce3B5KM66 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Syce3B5KM66 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Syce3B5KM66 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
Syce3B5KM66 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC19.4■□□□□ 0.7
Syce3B5KM66 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Syce3B5KM66 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.4■□□□□ 0.7
Syce3B5KM66 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Syce3B5KM66 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Syce3B5KM66 Gm10033-202ENSMUST00000211874 928 ntBASIC19.4■□□□□ 0.7
Syce3B5KM66 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Syce3B5KM66 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Syce3B5KM66 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Syce3B5KM66 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC19.4■□□□□ 0.7
Syce3B5KM66 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Syce3B5KM66 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Syce3B5KM66 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
Syce3B5KM66 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Syce3B5KM66 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Syce3B5KM66 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Syce3B5KM66 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Syce3B5KM66 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Syce3B5KM66 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.39■□□□□ 0.69
Syce3B5KM66 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Syce3B5KM66 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Syce3B5KM66 Gm6365-201ENSMUST00000054711 744 ntBASIC19.39■□□□□ 0.69
Syce3B5KM66 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Syce3B5KM66 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Syce3B5KM66 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC19.39■□□□□ 0.69
Syce3B5KM66 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Syce3B5KM66 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Syce3B5KM66 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Syce3B5KM66 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Syce3B5KM66 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Syce3B5KM66 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Syce3B5KM66 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Syce3B5KM66 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Syce3B5KM66 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Syce3B5KM66 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Syce3B5KM66 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Syce3B5KM66 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Syce3B5KM66 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Syce3B5KM66 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Syce3B5KM66 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Syce3B5KM66 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Syce3B5KM66 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Syce3B5KM66 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Syce3B5KM66 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Syce3B5KM66 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Syce3B5KM66 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Syce3B5KM66 Flg-201ENSMUST00000050758 1488 ntBASIC19.38■□□□□ 0.69
Syce3B5KM66 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Syce3B5KM66 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Syce3B5KM66 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Syce3B5KM66 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Syce3B5KM66 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Syce3B5KM66 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Syce3B5KM66 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Syce3B5KM66 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Syce3B5KM66 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Syce3B5KM66 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Syce3B5KM66 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Syce3B5KM66 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Syce3B5KM66 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Syce3B5KM66 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Syce3B5KM66 Gm10654-201ENSMUST00000098653 1633 ntBASIC19.37■□□□□ 0.69
Syce3B5KM66 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Syce3B5KM66 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Syce3B5KM66 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.37■□□□□ 0.69
Syce3B5KM66 Gm44549-201ENSMUST00000208351 577 ntBASIC19.37■□□□□ 0.69
Syce3B5KM66 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.37■□□□□ 0.69
Syce3B5KM66 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Syce3B5KM66 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Syce3B5KM66 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Syce3B5KM66 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Syce3B5KM66 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC19.37■□□□□ 0.69
Syce3B5KM66 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Syce3B5KM66 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Syce3B5KM66 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms