Protein–RNA interactions for Protein: B2RVW2

Clrn2, Clarin 2, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn2B2RVW2 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
Clrn2B2RVW2 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Clrn2B2RVW2 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Clrn2B2RVW2 Gm5953-201ENSMUST00000220644 2616 ntBASIC19.55■□□□□ 0.72
Clrn2B2RVW2 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Clrn2B2RVW2 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Clrn2B2RVW2 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Clrn2B2RVW2 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Clrn2B2RVW2 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC19.55■□□□□ 0.72
Clrn2B2RVW2 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Clrn2B2RVW2 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Clrn2B2RVW2 Cmtm5-203ENSMUST00000227441 610 ntBASIC19.55■□□□□ 0.72
Clrn2B2RVW2 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Clrn2B2RVW2 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Clrn2B2RVW2 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Clrn2B2RVW2 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Clrn2B2RVW2 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Clrn2B2RVW2 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Clrn2B2RVW2 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Clrn2B2RVW2 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Clrn2B2RVW2 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Clrn2B2RVW2 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC19.54■□□□□ 0.72
Clrn2B2RVW2 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Clrn2B2RVW2 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Clrn2B2RVW2 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Clrn2B2RVW2 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Clrn2B2RVW2 Gm15372-201ENSMUST00000120729 834 ntBASIC19.54■□□□□ 0.72
Clrn2B2RVW2 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC19.54■□□□□ 0.72
Clrn2B2RVW2 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
Clrn2B2RVW2 AC153794.1-201ENSMUST00000169148 126 ntBASIC19.54■□□□□ 0.72
Clrn2B2RVW2 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Clrn2B2RVW2 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC19.54■□□□□ 0.72
Clrn2B2RVW2 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Clrn2B2RVW2 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Clrn2B2RVW2 Gm5867-201ENSMUST00000063197 592 ntBASIC19.54■□□□□ 0.72
Clrn2B2RVW2 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Clrn2B2RVW2 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC19.54■□□□□ 0.72
Clrn2B2RVW2 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Clrn2B2RVW2 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Clrn2B2RVW2 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Clrn2B2RVW2 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Clrn2B2RVW2 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Clrn2B2RVW2 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC19.53■□□□□ 0.72
Clrn2B2RVW2 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Clrn2B2RVW2 Gm18733-201ENSMUST00000173950 856 ntBASIC19.53■□□□□ 0.72
Clrn2B2RVW2 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Clrn2B2RVW2 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Clrn2B2RVW2 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Clrn2B2RVW2 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Clrn2B2RVW2 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Clrn2B2RVW2 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Clrn2B2RVW2 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Clrn2B2RVW2 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC19.53■□□□□ 0.72
Clrn2B2RVW2 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Clrn2B2RVW2 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Clrn2B2RVW2 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Clrn2B2RVW2 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Clrn2B2RVW2 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Clrn2B2RVW2 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Clrn2B2RVW2 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Clrn2B2RVW2 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Clrn2B2RVW2 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Clrn2B2RVW2 AC108846.1-201ENSMUST00000214531 513 ntBASIC19.52■□□□□ 0.72
Clrn2B2RVW2 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Clrn2B2RVW2 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Clrn2B2RVW2 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Clrn2B2RVW2 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Clrn2B2RVW2 AC122335.2-201ENSMUST00000213901 6181 ntBASIC19.51■□□□□ 0.71
Clrn2B2RVW2 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Clrn2B2RVW2 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Clrn2B2RVW2 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC19.51■□□□□ 0.71
Clrn2B2RVW2 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC19.51■□□□□ 0.71
Clrn2B2RVW2 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC19.51■□□□□ 0.71
Clrn2B2RVW2 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC19.51■□□□□ 0.71
Clrn2B2RVW2 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Clrn2B2RVW2 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Clrn2B2RVW2 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Clrn2B2RVW2 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Clrn2B2RVW2 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Clrn2B2RVW2 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Clrn2B2RVW2 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Clrn2B2RVW2 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Clrn2B2RVW2 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Clrn2B2RVW2 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Clrn2B2RVW2 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Clrn2B2RVW2 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Clrn2B2RVW2 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Clrn2B2RVW2 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Clrn2B2RVW2 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Clrn2B2RVW2 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Clrn2B2RVW2 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Clrn2B2RVW2 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Clrn2B2RVW2 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC19.5■□□□□ 0.71
Clrn2B2RVW2 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Clrn2B2RVW2 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Clrn2B2RVW2 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Clrn2B2RVW2 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Clrn2B2RVW2 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Clrn2B2RVW2 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC19.5■□□□□ 0.71
Clrn2B2RVW2 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC19.5■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms