Protein–RNA interactions for Protein: B1AUS7

Ssxa1, Protein SSXA1, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssxa1B1AUS7 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Ssxa1B1AUS7 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ssxa1B1AUS7 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ssxa1B1AUS7 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ssxa1B1AUS7 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Ssxa1B1AUS7 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ssxa1B1AUS7 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ssxa1B1AUS7 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ssxa1B1AUS7 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Ssxa1B1AUS7 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC16.13■□□□□ 0.17
Ssxa1B1AUS7 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ssxa1B1AUS7 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ssxa1B1AUS7 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ssxa1B1AUS7 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ssxa1B1AUS7 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ssxa1B1AUS7 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ssxa1B1AUS7 Gm16061-201ENSMUST00000122167 857 ntBASIC16.13■□□□□ 0.17
Ssxa1B1AUS7 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC16.13■□□□□ 0.17
Ssxa1B1AUS7 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.13■□□□□ 0.17
Ssxa1B1AUS7 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Ssxa1B1AUS7 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ssxa1B1AUS7 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ssxa1B1AUS7 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ssxa1B1AUS7 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ssxa1B1AUS7 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ssxa1B1AUS7 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ssxa1B1AUS7 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
Ssxa1B1AUS7 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ssxa1B1AUS7 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ssxa1B1AUS7 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ssxa1B1AUS7 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ssxa1B1AUS7 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Ssxa1B1AUS7 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Ssxa1B1AUS7 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ssxa1B1AUS7 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ssxa1B1AUS7 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ssxa1B1AUS7 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ssxa1B1AUS7 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ssxa1B1AUS7 Gm6433-201ENSMUST00000118634 875 ntBASIC16.12■□□□□ 0.17
Ssxa1B1AUS7 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
Ssxa1B1AUS7 Gm13474-201ENSMUST00000122466 815 ntBASIC16.12■□□□□ 0.17
Ssxa1B1AUS7 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ssxa1B1AUS7 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Ssxa1B1AUS7 Gm7889-201ENSMUST00000185591 958 ntBASIC16.12■□□□□ 0.17
Ssxa1B1AUS7 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ssxa1B1AUS7 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ssxa1B1AUS7 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ssxa1B1AUS7 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ssxa1B1AUS7 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Ssxa1B1AUS7 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Ssxa1B1AUS7 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.12■□□□□ 0.17
Ssxa1B1AUS7 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ssxa1B1AUS7 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Ssxa1B1AUS7 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ssxa1B1AUS7 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Ssxa1B1AUS7 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ssxa1B1AUS7 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ssxa1B1AUS7 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ssxa1B1AUS7 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ssxa1B1AUS7 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.11■□□□□ 0.17
Ssxa1B1AUS7 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.11■□□□□ 0.17
Ssxa1B1AUS7 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Ssxa1B1AUS7 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.11■□□□□ 0.17
Ssxa1B1AUS7 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ssxa1B1AUS7 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC16.11■□□□□ 0.17
Ssxa1B1AUS7 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ssxa1B1AUS7 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Ssxa1B1AUS7 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ssxa1B1AUS7 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ssxa1B1AUS7 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ssxa1B1AUS7 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Ssxa1B1AUS7 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Ssxa1B1AUS7 Gm8668-201ENSMUST00000120559 1447 ntBASIC16.11■□□□□ 0.17
Ssxa1B1AUS7 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ssxa1B1AUS7 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Ssxa1B1AUS7 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ssxa1B1AUS7 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
Ssxa1B1AUS7 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ssxa1B1AUS7 Gm18959-201ENSMUST00000208954 655 ntBASIC16.1■□□□□ 0.17
Ssxa1B1AUS7 Gm7370-201ENSMUST00000219471 767 ntBASIC16.1■□□□□ 0.17
Ssxa1B1AUS7 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ssxa1B1AUS7 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ssxa1B1AUS7 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ssxa1B1AUS7 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ssxa1B1AUS7 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ssxa1B1AUS7 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ssxa1B1AUS7 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ssxa1B1AUS7 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ssxa1B1AUS7 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ssxa1B1AUS7 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.1■□□□□ 0.17
Ssxa1B1AUS7 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ssxa1B1AUS7 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ssxa1B1AUS7 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ssxa1B1AUS7 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ssxa1B1AUS7 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ssxa1B1AUS7 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Ssxa1B1AUS7 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16.09■□□□□ 0.17
Ssxa1B1AUS7 Mir5130-201ENSMUST00000175160 84 ntBASIC16.09■□□□□ 0.17
Ssxa1B1AUS7 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC16.09■□□□□ 0.17
Ssxa1B1AUS7 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms