Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chd6A3KFM7 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC13.75□□□□□ -0.21
Chd6A3KFM7 Gm5312-201ENSMUST00000203728 547 ntBASIC13.75□□□□□ -0.21
Chd6A3KFM7 Cdk7-205ENSMUST00000225990 1159 ntBASIC13.75□□□□□ -0.21
Chd6A3KFM7 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chd6A3KFM7 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chd6A3KFM7 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chd6A3KFM7 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chd6A3KFM7 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chd6A3KFM7 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chd6A3KFM7 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chd6A3KFM7 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chd6A3KFM7 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Chd6A3KFM7 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chd6A3KFM7 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC13.74□□□□□ -0.21
Chd6A3KFM7 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chd6A3KFM7 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chd6A3KFM7 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Chd6A3KFM7 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chd6A3KFM7 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chd6A3KFM7 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chd6A3KFM7 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Chd6A3KFM7 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chd6A3KFM7 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC13.74□□□□□ -0.21
Chd6A3KFM7 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC13.74□□□□□ -0.21
Chd6A3KFM7 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chd6A3KFM7 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Chd6A3KFM7 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chd6A3KFM7 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chd6A3KFM7 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chd6A3KFM7 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Chd6A3KFM7 Grk6-206ENSMUST00000224995 2971 ntBASIC13.74□□□□□ -0.21
Chd6A3KFM7 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chd6A3KFM7 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Chd6A3KFM7 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Chd6A3KFM7 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Chd6A3KFM7 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Chd6A3KFM7 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Chd6A3KFM7 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Chd6A3KFM7 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Chd6A3KFM7 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
Chd6A3KFM7 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC13.73□□□□□ -0.21
Chd6A3KFM7 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Chd6A3KFM7 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC13.73□□□□□ -0.21
Chd6A3KFM7 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Chd6A3KFM7 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Chd6A3KFM7 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Chd6A3KFM7 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC13.72□□□□□ -0.21
Chd6A3KFM7 Gm6007-201ENSMUST00000208170 823 ntBASIC13.72□□□□□ -0.21
Chd6A3KFM7 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Chd6A3KFM7 Gm7229-201ENSMUST00000214719 1007 ntBASIC13.72□□□□□ -0.21
Chd6A3KFM7 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Chd6A3KFM7 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Chd6A3KFM7 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Chd6A3KFM7 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Chd6A3KFM7 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Chd6A3KFM7 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Chd6A3KFM7 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Chd6A3KFM7 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Chd6A3KFM7 Gm44335-201ENSMUST00000196879 141 ntBASIC13.72□□□□□ -0.21
Chd6A3KFM7 Gm44297-201ENSMUST00000198304 141 ntBASIC13.72□□□□□ -0.21
Chd6A3KFM7 Gm44346-201ENSMUST00000198851 141 ntBASIC13.72□□□□□ -0.21
Chd6A3KFM7 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Chd6A3KFM7 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Chd6A3KFM7 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Chd6A3KFM7 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Chd6A3KFM7 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC13.71□□□□□ -0.21
Chd6A3KFM7 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Chd6A3KFM7 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Chd6A3KFM7 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Chd6A3KFM7 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Chd6A3KFM7 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Chd6A3KFM7 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Chd6A3KFM7 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Chd6A3KFM7 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Chd6A3KFM7 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Chd6A3KFM7 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC13.71□□□□□ -0.21
Chd6A3KFM7 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Chd6A3KFM7 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC13.71□□□□□ -0.21
Chd6A3KFM7 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Chd6A3KFM7 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Chd6A3KFM7 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Chd6A3KFM7 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Chd6A3KFM7 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Chd6A3KFM7 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Chd6A3KFM7 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.22
Chd6A3KFM7 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Chd6A3KFM7 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Chd6A3KFM7 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Chd6A3KFM7 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC13.7□□□□□ -0.22
Chd6A3KFM7 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC13.7□□□□□ -0.22
Chd6A3KFM7 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Chd6A3KFM7 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Chd6A3KFM7 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC13.7□□□□□ -0.22
Chd6A3KFM7 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chd6A3KFM7 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chd6A3KFM7 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Chd6A3KFM7 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chd6A3KFM7 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chd6A3KFM7 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms