Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Gm37519-201ENSMUST00000191687 2210 ntBASIC20.22■□□□□ 0.83
Cfap99A0A140LIX9 Gm5898-201ENSMUST00000121016 2071 ntBASIC20.22■□□□□ 0.83
Cfap99A0A140LIX9 Gm43808-201ENSMUST00000202534 2065 ntBASIC20.22■□□□□ 0.83
Cfap99A0A140LIX9 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cfap99A0A140LIX9 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cfap99A0A140LIX9 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cfap99A0A140LIX9 Gm19439-201ENSMUST00000198195 2273 ntBASIC20.22■□□□□ 0.83
Cfap99A0A140LIX9 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
Cfap99A0A140LIX9 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cfap99A0A140LIX9 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cfap99A0A140LIX9 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cfap99A0A140LIX9 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Cfap99A0A140LIX9 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cfap99A0A140LIX9 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cfap99A0A140LIX9 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC20.21■□□□□ 0.83
Cfap99A0A140LIX9 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Cfap99A0A140LIX9 Gm17971-201ENSMUST00000190239 806 ntBASIC20.21■□□□□ 0.83
Cfap99A0A140LIX9 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Cfap99A0A140LIX9 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cfap99A0A140LIX9 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cfap99A0A140LIX9 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Cfap99A0A140LIX9 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Cfap99A0A140LIX9 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cfap99A0A140LIX9 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cfap99A0A140LIX9 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Cfap99A0A140LIX9 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cfap99A0A140LIX9 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cfap99A0A140LIX9 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Cfap99A0A140LIX9 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC20.2■□□□□ 0.82
Cfap99A0A140LIX9 Gm29518-201ENSMUST00000190858 372 ntBASIC20.2■□□□□ 0.82
Cfap99A0A140LIX9 Gm37025-201ENSMUST00000195159 829 ntBASIC20.2■□□□□ 0.82
Cfap99A0A140LIX9 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC20.2■□□□□ 0.82
Cfap99A0A140LIX9 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cfap99A0A140LIX9 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cfap99A0A140LIX9 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cfap99A0A140LIX9 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cfap99A0A140LIX9 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Cfap99A0A140LIX9 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cfap99A0A140LIX9 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Cfap99A0A140LIX9 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cfap99A0A140LIX9 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cfap99A0A140LIX9 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cfap99A0A140LIX9 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cfap99A0A140LIX9 Gm9731-201ENSMUST00000209480 747 ntBASIC20.19■□□□□ 0.82
Cfap99A0A140LIX9 Gm7213-201ENSMUST00000215977 950 ntBASIC20.19■□□□□ 0.82
Cfap99A0A140LIX9 Il3ra-202ENSMUST00000223589 738 ntBASIC20.19■□□□□ 0.82
Cfap99A0A140LIX9 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cfap99A0A140LIX9 Gm43272-201ENSMUST00000200599 1584 ntBASIC20.19■□□□□ 0.82
Cfap99A0A140LIX9 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cfap99A0A140LIX9 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Cfap99A0A140LIX9 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cfap99A0A140LIX9 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
Cfap99A0A140LIX9 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cfap99A0A140LIX9 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Cfap99A0A140LIX9 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cfap99A0A140LIX9 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cfap99A0A140LIX9 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Cfap99A0A140LIX9 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cfap99A0A140LIX9 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cfap99A0A140LIX9 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Cfap99A0A140LIX9 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cfap99A0A140LIX9 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Cfap99A0A140LIX9 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cfap99A0A140LIX9 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cfap99A0A140LIX9 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cfap99A0A140LIX9 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Cfap99A0A140LIX9 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cfap99A0A140LIX9 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cfap99A0A140LIX9 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cfap99A0A140LIX9 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Cfap99A0A140LIX9 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Cfap99A0A140LIX9 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cfap99A0A140LIX9 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cfap99A0A140LIX9 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cfap99A0A140LIX9 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cfap99A0A140LIX9 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Cfap99A0A140LIX9 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cfap99A0A140LIX9 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cfap99A0A140LIX9 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cfap99A0A140LIX9 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cfap99A0A140LIX9 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Cfap99A0A140LIX9 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Cfap99A0A140LIX9 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Cfap99A0A140LIX9 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cfap99A0A140LIX9 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cfap99A0A140LIX9 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cfap99A0A140LIX9 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cfap99A0A140LIX9 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC20.17■□□□□ 0.82
Cfap99A0A140LIX9 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
Cfap99A0A140LIX9 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC20.17■□□□□ 0.82
Cfap99A0A140LIX9 Gm17807-201ENSMUST00000186869 298 ntBASIC20.17■□□□□ 0.82
Cfap99A0A140LIX9 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cfap99A0A140LIX9 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cfap99A0A140LIX9 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cfap99A0A140LIX9 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Cfap99A0A140LIX9 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cfap99A0A140LIX9 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cfap99A0A140LIX9 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cfap99A0A140LIX9 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cfap99A0A140LIX9 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms