Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc194A0A140LIT1 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc194A0A140LIT1 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc194A0A140LIT1 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc194A0A140LIT1 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc194A0A140LIT1 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc194A0A140LIT1 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc194A0A140LIT1 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.84■□□□□ 0.29
Ccdc194A0A140LIT1 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc194A0A140LIT1 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc194A0A140LIT1 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.84■□□□□ 0.29
Ccdc194A0A140LIT1 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc194A0A140LIT1 AC135637.1-201ENSMUST00000227750 365 ntBASIC16.84■□□□□ 0.29
Ccdc194A0A140LIT1 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc194A0A140LIT1 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Ccdc194A0A140LIT1 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Ccdc194A0A140LIT1 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc194A0A140LIT1 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc194A0A140LIT1 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc194A0A140LIT1 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc194A0A140LIT1 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC16.84■□□□□ 0.29
Ccdc194A0A140LIT1 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc194A0A140LIT1 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.84■□□□□ 0.29
Ccdc194A0A140LIT1 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc194A0A140LIT1 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc194A0A140LIT1 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Ccdc194A0A140LIT1 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ccdc194A0A140LIT1 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Ccdc194A0A140LIT1 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ccdc194A0A140LIT1 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.83■□□□□ 0.29
Ccdc194A0A140LIT1 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ccdc194A0A140LIT1 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc194A0A140LIT1 Gm15378-201ENSMUST00000121894 207 ntBASIC16.83■□□□□ 0.28
Ccdc194A0A140LIT1 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Ccdc194A0A140LIT1 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Ccdc194A0A140LIT1 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc194A0A140LIT1 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc194A0A140LIT1 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc194A0A140LIT1 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc194A0A140LIT1 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
Ccdc194A0A140LIT1 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc194A0A140LIT1 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc194A0A140LIT1 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc194A0A140LIT1 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.83■□□□□ 0.28
Ccdc194A0A140LIT1 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc194A0A140LIT1 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc194A0A140LIT1 Gm12527-201ENSMUST00000117967 564 ntBASIC16.82■□□□□ 0.28
Ccdc194A0A140LIT1 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC16.82■□□□□ 0.28
Ccdc194A0A140LIT1 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC16.82■□□□□ 0.28
Ccdc194A0A140LIT1 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc194A0A140LIT1 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Ccdc194A0A140LIT1 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Ccdc194A0A140LIT1 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc194A0A140LIT1 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc194A0A140LIT1 CT010444.2-201ENSMUST00000217877 1629 ntBASIC16.81■□□□□ 0.28
Ccdc194A0A140LIT1 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.81■□□□□ 0.28
Ccdc194A0A140LIT1 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Ccdc194A0A140LIT1 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc194A0A140LIT1 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc194A0A140LIT1 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Ccdc194A0A140LIT1 Gm37025-201ENSMUST00000195159 829 ntBASIC16.81■□□□□ 0.28
Ccdc194A0A140LIT1 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC16.81■□□□□ 0.28
Ccdc194A0A140LIT1 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.81■□□□□ 0.28
Ccdc194A0A140LIT1 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc194A0A140LIT1 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc194A0A140LIT1 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc194A0A140LIT1 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc194A0A140LIT1 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc194A0A140LIT1 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc194A0A140LIT1 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Ccdc194A0A140LIT1 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc194A0A140LIT1 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc194A0A140LIT1 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc194A0A140LIT1 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc194A0A140LIT1 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc194A0A140LIT1 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc194A0A140LIT1 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc194A0A140LIT1 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc194A0A140LIT1 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc194A0A140LIT1 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
Ccdc194A0A140LIT1 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc194A0A140LIT1 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Ccdc194A0A140LIT1 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc194A0A140LIT1 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc194A0A140LIT1 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.8■□□□□ 0.28
Ccdc194A0A140LIT1 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.8■□□□□ 0.28
Ccdc194A0A140LIT1 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc194A0A140LIT1 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc194A0A140LIT1 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc194A0A140LIT1 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Ccdc194A0A140LIT1 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc194A0A140LIT1 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc194A0A140LIT1 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc194A0A140LIT1 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc194A0A140LIT1 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.8■□□□□ 0.28
Ccdc194A0A140LIT1 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc194A0A140LIT1 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc194A0A140LIT1 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc194A0A140LIT1 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Ccdc194A0A140LIT1 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms